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Report for CCDS30864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30864.1 Public Homo sapiens 1 SPRR2D 24 110 108 CCDS HistoryNCBI Gene:6703Re-query CCDS DB by CCDS ID:30864.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30864.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360379.4 ENSP00000353542.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360379.4Link to Ensembl Protein Viewer:ENSP00000353542.3Re-query CCDS DB by Nucleotide ID:ENST00000360379Re-query CCDS DB by Protein ID:ENSP00000353542
Original member Current member EBI ENST00000368756.1 ENSP00000357745.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368756.1Link to Ensembl Protein Viewer:ENSP00000357745.1Re-query CCDS DB by Nucleotide ID:ENST00000368756Re-query CCDS DB by Protein ID:ENSP00000357745
Original member Current member EBI ENST00000368757.1 ENSP00000357746.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368757.1Link to Ensembl Protein Viewer:ENSP00000357746.1Re-query CCDS DB by Nucleotide ID:ENST00000368757Re-query CCDS DB by Protein ID:ENSP00000357746
Original member Current member EBI ENST00000368758.3 ENSP00000357747.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000368758.3Link to Ensembl Protein Viewer:ENSP00000357747.3Re-query CCDS DB by Nucleotide ID:ENST00000368758Re-query CCDS DB by Protein ID:ENSP00000357747
Original member Current member NCBI NM_001382248.1 NP_001369177.1 Accepted alive Link to Nucleotide Sequence:NM_001382248.1Link to Protein Sequence:NP_001369177.1Re-query CCDS DB by Nucleotide ID:NM_001382248Re-query CCDS DB by Protein ID:NP_001369177Link to BLAST:NP_001369177.1
Original member Current member NCBI NM_006945.5 NP_008876.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006945.5Link to Protein Sequence:NP_008876.3Re-query CCDS DB by Nucleotide ID:NM_006945Re-query CCDS DB by Protein ID:NP_008876Link to BLAST:NP_008876.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369177.1 72 P22532 72 100% 0 0
NP_008876.3 72 P22532 72 100% 0 0

Chromosomal Locations for CCDS 30864.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 153040128 153040346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (219 nt):
ATGTCTTATCAACAGCAGCAGTGCAAGCAGCCCTGCCAGCCACCTCCTGTGTGCCCCACGCCAAAGTGCC
CAGAGCCATGTCCACCCCCGAAGTGCCCTGAGCCCTGCCCATCACCAAAGTGTCCACAGCCCTGCCCACC
TCAGCAGTGCCAGCAGAAATATCCTCCTGTGACACCTTCCCCACCCTGCCAGCCAAAGTGTCCACCCAAG
AGCAAGTAA

Translation (72 aa):
MSYQQQQCKQPCQPPPVCPTPKCPEPCPPPKCPEPCPSPKCPQPCPPQQCQQKYPPVTPSPPCQPKCPPK
SK


Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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