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Report for CCDS13968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13968.1 Public Homo sapiens 22 MAFF 24 110 108 CCDS HistoryNCBI Gene:23764Re-query CCDS DB by CCDS ID:13968.1Re-query CCDS DB by GeneID:23764See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338483.7 ENSP00000345393.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338483.7Link to Ensembl Protein Viewer:ENSP00000345393.2Re-query CCDS DB by Nucleotide ID:ENST00000338483Re-query CCDS DB by Protein ID:ENSP00000345393
Original member Current member EBI ENST00000407965.1 ENSP00000384094.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407965.1Link to Ensembl Protein Viewer:ENSP00000384094.1Re-query CCDS DB by Nucleotide ID:ENST00000407965Re-query CCDS DB by Protein ID:ENSP00000384094
Original member Current member EBI ENST00000426621.6 ENSP00000388882.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426621.6Link to Ensembl Protein Viewer:ENSP00000388882.2Re-query CCDS DB by Nucleotide ID:ENST00000426621Re-query CCDS DB by Protein ID:ENSP00000388882
Original member Current member EBI ENST00000538320.5 ENSP00000442060.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538320.5Link to Ensembl Protein Viewer:ENSP00000442060.1Re-query CCDS DB by Nucleotide ID:ENST00000538320Re-query CCDS DB by Protein ID:ENSP00000442060
Original member Current member NCBI NM_001161572.2 NP_001155044.1 Accepted alive Link to Nucleotide Sequence:NM_001161572.2Link to Protein Sequence:NP_001155044.1Re-query CCDS DB by Nucleotide ID:NM_001161572Re-query CCDS DB by Protein ID:NP_001155044Link to BLAST:NP_001155044.1
Original member Current member NCBI NM_001161573.1 NP_001155045.1 Accepted alive Link to Nucleotide Sequence:NM_001161573.1Link to Protein Sequence:NP_001155045.1Re-query CCDS DB by Nucleotide ID:NM_001161573Re-query CCDS DB by Protein ID:NP_001155045Link to BLAST:NP_001155045.1
Original member Current member NCBI NM_012323.4 NP_036455.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012323.4Link to Protein Sequence:NP_036455.1Re-query CCDS DB by Nucleotide ID:NM_012323Re-query CCDS DB by Protein ID:NP_036455Link to BLAST:NP_036455.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155044.1 164 Q9ULX9-1 164 100% 0 0
NP_001155045.1 164 Q9ULX9-1 164 100% 0 0
NP_036455.1 164 Q9ULX9-1 164 100% 0 0

Chromosomal Locations for CCDS 13968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 38213854 38213889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 38214420 38214878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (495 nt):
ATGTCTGTGGATCCCCTATCCAGCAAAGCTCTAAAGATCAAGCGAGAGCTGAGCGAGAACACGCCGCACC
TGTCGGACGAGGCGCTGATGGGGCTGTCGGTGCGCGAGCTGAACCGGCATCTGCGCGGGCTCTCCGCCGA
GGAGGTGACACGGCTCAAGCAGCGGCGCCGCACACTCAAAAACCGTGGCTACGCCGCCAGCTGCCGCGTG
AAGCGCGTGTGCCAGAAGGAGGAGCTGCAGAAGCAGAAGTCGGAGCTGGAGCGCGAGGTGGACAAGCTGG
CGCGCGAGAACGCCGCCATGCGCCTGGAGCTCGACGCGCTGCGCGGCAAGTGCGAGGCGCTGCAGGGCTT
CGCGCGCTCCGTGGCCGCCGCCCGCGGGCCCGCCACGCTCGTGGCGCCGGCCAGCGTCATCACCATCGTC
AAGTCCACCCCGGGCTCGGGGTCTGGCCCCGCCCACGGCCCGGACCCCGCCCACGGCCCGGCCTCCTGCT
CCTAG

Translation (164 aa):
MSVDPLSSKALKIKRELSENTPHLSDEALMGLSVRELNRHLRGLSAEEVTRLKQRRRTLKNRGYAASCRV
KRVCQKEELQKQKSELEREVDKLARENAAMRLELDALRGKCEALQGFARSVAAARGPATLVAPASVITIV
KSTPGSGSGPAHGPDPAHGPASCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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