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Report for CCDS36566.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36566.1 Public Mus musculus 12 Atp5mj 23 108 98 CCDS HistoryNCBI Gene:70257Re-query CCDS DB by CCDS ID:36566.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36566.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000021719.6 ENSMUSP00000021719.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000021719.6Link to Ensembl Protein Viewer:ENSMUSP00000021719.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000021719Re-query CCDS DB by Protein ID:ENSMUSP00000021719
Original member Current member EBI ENSMUST00000222874.1 ENSMUSP00000152618.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000222874.1Link to Ensembl Protein Viewer:ENSMUSP00000152618.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000222874Re-query CCDS DB by Protein ID:ENSMUSP00000152618
Original member Current member NCBI NM_001361914.1 NP_001348843.1 Accepted alive Link to Nucleotide Sequence:NM_001361914.1Link to Protein Sequence:NP_001348843.1Re-query CCDS DB by Nucleotide ID:NM_001361914Re-query CCDS DB by Protein ID:NP_001348843Link to BLAST:NP_001348843.1
Original member Current member NCBI NM_027360.3 NP_081636.1 Accepted alive Link to Nucleotide Sequence:NM_027360.3Link to Protein Sequence:NP_081636.1Re-query CCDS DB by Nucleotide ID:NM_027360Re-query CCDS DB by Protein ID:NP_081636Link to BLAST:NP_081636.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001348843.1 58 P56379 58 100% 0 0
NP_081636.1 58 P56379 58 100% 0 0

Chromosomal Locations for CCDS 36566.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 111961510 111961538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 111962433 111962456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 111963230 111963353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (177 nt):
ATGTTTCAAACCTTGATTCAAAAAGTCTGGGTCCCCATGAAACCCTACTATACCCAGGTTTACCAGGAAA
TTTGGGTAGGAGTGGGGTTAATGAGCCTCATCGTATATAAAATCAGGAGTGCTGATAAAAGAAGTAAAGC
TTTGAAAGGTCCTGCACCTGCCCATGGCCATCACTAA

Translation (58 aa):
MFQTLIQKVWVPMKPYYTQVYQEIWVGVGLMSLIVYKIRSADKRSKALKGPAPAHGHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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