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Report for CCDS90878.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90878.1 Public Homo sapiens 1 C1QB 24 110 108 CCDS HistoryNCBI Gene:713Re-query CCDS DB by CCDS ID:90878.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 90878.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000509305.6 ENSP00000423689.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000509305.6Link to Ensembl Protein Viewer:ENSP00000423689.1Re-query CCDS DB by Nucleotide ID:ENST00000509305Re-query CCDS DB by Protein ID:ENSP00000423689
Original member Current member EBI ENST00000695754.1 ENSP00000512147.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695754.1Link to Ensembl Protein Viewer:ENSP00000512147.1Re-query CCDS DB by Nucleotide ID:ENST00000695754Re-query CCDS DB by Protein ID:ENSP00000512147
Original member Current member EBI ENST00000695755.1 ENSP00000512148.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695755.1Link to Ensembl Protein Viewer:ENSP00000512148.1Re-query CCDS DB by Nucleotide ID:ENST00000695755Re-query CCDS DB by Protein ID:ENSP00000512148
Original member Current member EBI ENST00000695756.1 ENSP00000512149.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695756.1Link to Ensembl Protein Viewer:ENSP00000512149.1Re-query CCDS DB by Nucleotide ID:ENST00000695756Re-query CCDS DB by Protein ID:ENSP00000512149
Original member Current member EBI ENST00000695757.1 ENSP00000512150.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695757.1Link to Ensembl Protein Viewer:ENSP00000512150.1Re-query CCDS DB by Nucleotide ID:ENST00000695757Re-query CCDS DB by Protein ID:ENSP00000512150
Original member Current member NCBI NM_001371184.3 NP_001358113.2 Accepted alive Link to Nucleotide Sequence:NM_001371184.3Link to Protein Sequence:NP_001358113.2Re-query CCDS DB by Nucleotide ID:NM_001371184Re-query CCDS DB by Protein ID:NP_001358113Link to BLAST:NP_001358113.2
Original member Current member NCBI NM_001378156.1 NP_001365085.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001378156.1Link to Protein Sequence:NP_001365085.1Re-query CCDS DB by Nucleotide ID:NM_001378156Re-query CCDS DB by Protein ID:NP_001365085Link to BLAST:NP_001365085.1

Chromosomal Locations for CCDS 90878.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 22659463 22659643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 22660812 22661386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (756 nt):
ATGAAGATCCCATGGGGCAGCATCCCAGTACTGATGTTGCTCCTGCTCCTGGGCCTAATCGATATCTCCC
AGGCCCAGCTCAGCTGCACCGGGCCCCCAGCCATCCCTGGCATCCCGGGTATCCCTGGGACACCTGGCCC
CGATGGCCAACCTGGGACCCCAGGGATAAAAGGAGAGAAAGGGCTTCCAGGGCTGGCTGGAGACCATGGT
GAGTTCGGAGAGAAGGGAGACCCAGGGATTCCTGGGAATCCAGGAAAAGTCGGCCCCAAGGGCCCCATGG
GCCCTAAAGGTGGCCCAGGGGCCCCTGGAGCCCCAGGCCCCAAAGGTGAATCGGGAGACTACAAGGCCAC
CCAGAAAATCGCCTTCTCTGCCACAAGAACCATCAACGTCCCCCTGCGCCGGGACCAGACCATCCGCTTC
GACCACGTGATCACCAACATGAACAACAATTATGAGCCCCGCAGTGGCAAGTTCACCTGCAAGGTGCCCG
GTCTCTACTACTTCACCTACCACGCCAGCTCTCGAGGGAACCTGTGCGTGAACCTCATGCGTGGCCGGGA
GCGTGCACAGAAGGTGGTCACCTTCTGTGACTATGCCTACAACACCTTCCAGGTCACCACCGGTGGCATG
GTCCTCAAGCTGGAGCAGGGGGAGAACGTCTTCCTGCAGGCCACCGACAAGAACTCACTACTGGGCATGG
AGGGTGCCAACAGCATCTTTTCCGGGTTCCTGCTCTTTCCAGATATGGAGGCCTGA

Translation (251 aa):
MKIPWGSIPVLMLLLLLGLIDISQAQLSCTGPPAIPGIPGIPGTPGPDGQPGTPGIKGEKGLPGLAGDHG
EFGEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSATRTINVPLRRDQTIRF
DHVITNMNNNYEPRSGKFTCKVPGLYYFTYHASSRGNLCVNLMRGRERAQKVVTFCDYAYNTFQVTTGGM
VLKLEQGENVFLQATDKNSLLGMEGANSIFSGFLLFPDMEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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