CCDS Report for Consensus CDS

PubMed

Entrez

Gene

BLAST

OMIM

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Genome Displays

	Ensembl
	NCBI
	UCSC
	VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS91029.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
91029.1	Public	Homo sapiens	1	NBPF8	24	110	108

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91029.1

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000698216.1	ENSP00000513610.1	MANE Select	Accepted	alive
		NCBI	NM_001037501.5	NP_001032590.2	MANE Select	Accepted	alive

Chromosomal Locations for CCDS 91029.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)

Genome Browser links:

Chromosome	Start	Stop
1	120436523	120436697
1	120438544	120438646
1	120439476	120439690
1	120440742	120440814
1	120441278	120441489
1	120449193	120449402
1	120451180	120451282
1	120452117	120452331
1	120453372	120453444
1	120453909	120454114
1	120455409	120455460
1	120459367	120459530
1	120460573	120460624
1	120461254	120461426
1	120462146	120462197
1	120462794	120462966
1	120463676	120463727
1	120464376	120464548
1	120465263	120465371
1	120465978	120466221

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2829 nt):
ATGGTGGTATCAGCCGGCCCTTGGTCCAGCGAGAAGGCAGAGATGAACATTCTAGAAATCAACGAGAAAT TGCGCCCCCAGTTGGCAGAGAACAAACAGCAGTTCGTAAACCTCAAAGAGAGATGTTTTCTAACTCAACT GGCCGGCTTCCTGGCCAACCGACAGAAGAAATACAAGTATGAAGAGTGTAAAGACCTCATAAGATTTATG CTGAGGAATGAGCGACAGTTCAAGGAGGAGAAGCTTGCAGAGCAGCTCAAGCAAGCTGAGGAGCTCAGGC AATATAAAGTCCTGGTTCACTCTCAGGAACGAGAGCTGACGCAGTTAAAGGAGAAGTTACAGGAAGGGAG AGATGCCTCCCGCTCATTGAATGAGCATCTCCAGGCCCTCCTCACTCTGGATGAGCCGGACAAGTCCCAG GGGCAGGACCTCCAAGAACAGCTGGCTGAGGGGTGTAGACTGGCACAGCACCTTGTCCAAAAGCTCAGCC CAGAAAATGACGAAGATGAGGATGAAGATGTTCAAGTTGAGGAGGATGAGAAAGTGCAGAAATCATCTGC CCCCAGGGAGGTGCAGAAGGCTGAAGAGAGCAAAGTCCCTGAGGACTCACTGGAGGAATGTGCCATCACT TGTTCAAATAGCCACGGCCCTTGTGACTCCAACCAGCCTCACAAGAACATCAAAATCACATTTGAGGAAG ACGAAGTCAACTCAACTCTGGTTGTAGACAGAGAATCCTCTCATGATGAATGTCAGGATGCTCTAAACAT TCTCTCAGTCCCTGGCCCCACCTCTTCTGCCACAAACGTCAGCATGGTGGTATCAGCCGGCCCTTTGTCC AGCGAGAAGGCAGAGATGAACATTCTAGAAATCAATGAGAAATTGCACCCCCAGCTGGCAGAGAAGAAAC AGCAGTTCAGAAACCTCAAAGAGAAATGTTTTCTAACTCAACTGGCCGGCTTCCTGGCCAACCGACAGAA CAAATACAAATATGAAGAGTGCAAAGATCTCATAAAATCTATGCTGAGGAATGAGCGACAGTTCAAGGAG GAGAAGCTTGCAGAGCAGCTCAAGCAAGCTGAGGAGCTCAGGCAATATAAAGTCCTGGTTCACACTCAGG AACGAGAGCTGACCCAGTTAAGGGAGAAGTTGCGGGAAGGGAGAGATGCCTCCCTCTCATTGAATGAGCA TCTCCAGGCCCTCCTCACTCCGGATGAGCCGGACAAGTCCCAGGGGCAGGACCTCCAAGAACAGCTGGCT GAGGGGTGTAGACTGGCACAGCACCTTGTCCAAAAGCTCAGCCCAGAAAATGACAACGATGACGATGAAG ATGTTCAAGTTGAGGTGGCTGAGAAAGTGCAGAAATCGTCTGCCCCCAGGGAGATGCAGAAGGCTGAAGA AAAGGAAGTCCCTGAGGACTCACTGGAGGAATGTGCCATCACTTATTCAAATAGCCATGGCCCTTATGAC TCCAACCAGCCACATAGGAAAACCAAAATCACATTTGAGGAAGACAAAGTCGACTCAGCTCTCATTGGCT CATCCTCTCATGTTGAATGGGAGGATGCTGTACACATTATTCCAGAAAATGAAAGTGATGATGAGGAAGA GGAAGAAAAAGGACCAGTGTCTCCCAGGAATCTGCAGGAGTCTGAAGAGGAGGAAGTCCCCCAGGAGTCC TGGGATGAAGGTTATTCGACTCTCTCAATTCCTCCTGAAATGTTGGCCTCGTACAAGTCTTACAGCAGCA CATTTCACTCATTAGAGGAACAGCAAGTCTGCATGGCTGTTGACATAGGCAGACATCGGTGGGATCAAGT GAAAAAGGAGGACCAAGAGGCAACAGGTCCCAGGCTCAGCAGGGAGCTGCTGGATGAGAAAGGGCCTGAA GTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTTCAGGTTGCCTTGAACTGACTGACTCATGCC AGCCCTACAGAAGTGCGTTTTACATATTGGAGCAACAGCGTGTTGGCTTGGCTGTTGACATGGATGAAAT TGAAAAGTACCAAGAAGTGGAAGAAGACCAAGACCCATCATGCCCCAGGCTCAGCAGGGAGCTGCTGGAT GAGAAAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCGACTCCTTCAGGTTATCTTGAAC TGCCTGACTTAGGCCAGCCCTACAGCAGTGCTGTTTACTCATTGGAGGAACAGTACCTTGGCTTGGCTCT TGACGTGGACAGAATTAAAAAGGACCAAGAAGAGGAAGAAGACCAAGGCCCACCATGCCCCAGGCTCAGC AGGGAGCTGCTGGAGGTAGTAGAGCCTGAAGTCTTGCAGGACTCACTGGATAGATGTTATTCAACTCCTT CCAGTTGTCTTGAACAGCCTGACTCCTGCCAGCCGTATGGAAGTTCCTTTTATGCATTGGAGGAAAAACA TGTTGGCTTTTCTCTTGACGTGGGAGAAATTGAAAAGAAGGGGAAGGGGAAGATAAGAAGGGGAAGAAGA TCAAAGAAGAAAAGAAGAAGGGGAAGAAAAGAAGGGGAAGAAGATCAAAACCCACCATGCCCCAGGCTCA ACAGCGTGCTGATGGAAGTGGAAGAGCCTGAAGTCTTACAGGACTCACTGGATAGATGTTATTCGACTCC ATCAATGTACTGTGAACTACGTGACTCATTCCAGCACTACAGAAGTGTGTTTTACTCATTTGAGGAACAG CACATCAGCTTTGCCCTTGACATGGACAATAGGTTCTTTACTTTGACGGTGACAAGTCTCTATCTGGTCT TCCAGATGGGAGTCATATTCCCACAATAA
Translation (942 aa):
MVVSAGPWSSEKAEMNILEINEKLRPQLAENKQQFVNLKERCFLTQLAGFLANRQKKYKYEECKDLIRFM LRNERQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLKEKLQEGRDASRSLNEHLQALLTLDEPDKSQ GQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEDEKVQKSSAPREVQKAEESKVPEDSLEECAIT CSNSHGPCDSNQPHKNIKITFEEDEVNSTLVVDRESSHDECQDALNILSVPGPTSSATNVSMVVSAGPLS SEKAEMNILEINEKLHPQLAEKKQQFRNLKEKCFLTQLAGFLANRQNKYKYEECKDLIKSMLRNERQFKE EKLAEQLKQAEELRQYKVLVHTQERELTQLREKLREGRDASLSLNEHLQALLTPDEPDKSQGQDLQEQLA EGCRLAQHLVQKLSPENDNDDDEDVQVEVAEKVQKSSAPREMQKAEEKEVPEDSLEECAITYSNSHGPYD SNQPHRKTKITFEEDKVDSALIGSSSHVEWEDAVHIIPENESDDEEEEEKGPVSPRNLQESEEEEVPQES WDEGYSTLSIPPEMLASYKSYSSTFHSLEEQQVCMAVDIGRHRWDQVKKEDQEATGPRLSRELLDEKGPE VLQDSLDRCYSTPSGCLELTDSCQPYRSAFYILEQQRVGLAVDMDEIEKYQEVEEDQDPSCPRLSRELLD EKEPEVLQDSLDRCYSTPSGYLELPDLGQPYSSAVYSLEEQYLGLALDVDRIKKDQEEEEDQGPPCPRLS RELLEVVEPEVLQDSLDRCYSTPSSCLEQPDSCQPYGSSFYALEEKHVGFSLDVGEIEKKGKGKIRRGRR SKKKRRRGRKEGEEDQNPPCPRLNSVLMEVEEPEVLQDSLDRCYSTPSMYCELRDSFQHYRSVFYSFEEQ HISFALDMDNRFFTLTVTSLYLVFQMGVIFPQ

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH