NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47694.1 Public Homo sapiens 7 TMEM229A 24 110 108 CCDS HistoryNCBI Gene:730130Re-query CCDS DB by CCDS ID:47694.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47694.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455783.3 ENSP00000395244.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000455783.3Link to Ensembl Protein Viewer:ENSP00000395244.1Re-query CCDS DB by Nucleotide ID:ENST00000455783Re-query CCDS DB by Protein ID:ENSP00000395244
Original member Current member NCBI NM_001136002.2 NP_001129474.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136002.2Link to Protein Sequence:NP_001129474.1Re-query CCDS DB by Nucleotide ID:NM_001136002Re-query CCDS DB by Protein ID:NP_001129474Link to BLAST:NP_001129474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129474.1 380 B2RXF0 380 100% 0 0

Chromosomal Locations for CCDS 47694.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 124031861 124033003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1143 nt):
ATGGCGGGGAGCGACGTGGACAGCGAGGGCCCCGCACGGAGGGGCGGCGCGGCGCGGCGTCCGGGGGCCC
CTGGCGGGCCAGGAAGCGAGGCGGCAGCCGGCTGCCCGGAGCCGCTGTCCACTGCTGAAGCGCCGGCTGA
GAGCGCCACGCTGCCCGCCTGGATGCGCCTCTACTTCTACGGGATGCACGGGATCACCCTGGACGTGCTG
GTGTCCTCGGCCCGGCGCTTCGCCCGCAGCCCGGACCTGCGGATGCTAGGCTTCTCCTCGCCCTACCGCT
GCCTGCTGCACTCGCTCACCCATTTCGCCCTGGAGAAGGTGTACCTGCAGCAGCGGCGCTGTCCCAACGC
CTTCGTCTTCAATTTCCTCCTCTACCCCTCGGCCCACGTGGGGCTGCAGACCCTAGCGGGCCAGGCGCTA
CTACTCAGCCTGGGCGGCGGGGCGGGGGTCGCGGTGGCGCCAGGGGCGCTGGACCTGGCGCTGCAGTACG
TGCTGGCGCTCTACCACTGCCAAGTGTTCCTGAAGCGCTTCCTGCGCTTGCGGTACGGGCGACAGAGGCG
GCGGCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCGGAGGGGCGCGCTCCCCGTCCCTCCCGGC
GCCCGGGTCCCTACTGCGGCCGGAGCCCGGCGGCGACGACCCCGTGGCCCCAGGGGCGCCGGGGGAGCCC
CCAGCCAGGGGCTGCCCGACCTACCCCGCTTTCTTTTCTTCGGAATGCACGGCTTTCTGGATGAGATCTT
CTTCACCTTCTTCTTCAACGTACTGGGGCAGGGGGACGGGACAACCAGCGGCCACACGTCGCTCTGGTCC
TTCTTTATGTACGGCAGCTGCAGTTTCGTGGTGGAAAAGCTCTACTTCCACCTCCACTACAGCCGCGGTT
GGGGCACTTGGAAGCGGGTGCCCATCTACGTGATCTTCATCTACGTGTGGGAGCTGTCCTGGGGTCTGGG
ACTCCGCACGTGCGGGGCTTGTTCCTGGGACTATTCTCACTACCCGCTCAATTTTATGGGCCTCATCACC
CTGATGTATTTACCTGGCTGGATATTCCTTAGTGTGTACCAGGACCTAATTTCCAACGTGTTGTGGAGGG
TGCAGTACGTACCAGCTAACTAA

Translation (380 aa):
MAGSDVDSEGPARRGGAARRPGAPGGPGSEAAAGCPEPLSTAEAPAESATLPAWMRLYFYGMHGITLDVL
VSSARRFARSPDLRMLGFSSPYRCLLHSLTHFALEKVYLQQRRCPNAFVFNFLLYPSAHVGLQTLAGQAL
LLSLGGGAGVAVAPGALDLALQYVLALYHCQVFLKRFLRLRYGRQRRRQQQQQQQQQQQQRRGALPVPPG
ARVPTAAGARRRRPRGPRGAGGAPSQGLPDLPRFLFFGMHGFLDEIFFTFFFNVLGQGDGTTSGHTSLWS
FFMYGSCSFVVEKLYFHLHYSRGWGTWKRVPIYVIFIYVWELSWGLGLRTCGACSWDYSHYPLNFMGLIT
LMYLPGWIFLSVYQDLISNVLWRVQYVPAN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH