NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14309.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14309.1 Public Homo sapiens X PQBP1 24 110 108 CCDS HistoryNCBI Gene:10084Re-query CCDS DB by CCDS ID:14309.1Re-query CCDS DB by GeneID:10084See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14309.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218224.9 ENSP00000218224.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000218224.9Link to Ensembl Protein Viewer:ENSP00000218224.4Re-query CCDS DB by Nucleotide ID:ENST00000218224Re-query CCDS DB by Protein ID:ENSP00000218224
Original member Current member EBI ENST00000376563.6 ENSP00000365747.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376563.6Link to Ensembl Protein Viewer:ENSP00000365747.1Re-query CCDS DB by Nucleotide ID:ENST00000376563Re-query CCDS DB by Protein ID:ENSP00000365747
Original member Current member EBI ENST00000396763.6 ENSP00000379985.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396763.6Link to Ensembl Protein Viewer:ENSP00000379985.1Re-query CCDS DB by Nucleotide ID:ENST00000396763Re-query CCDS DB by Protein ID:ENSP00000379985
Original member Current member EBI ENST00000447146.7 ENSP00000391759.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447146.7Link to Ensembl Protein Viewer:ENSP00000391759.2Re-query CCDS DB by Nucleotide ID:ENST00000447146Re-query CCDS DB by Protein ID:ENSP00000391759
Original member Current member EBI ENST00000443648.6 ENSP00000414861.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443648.6Link to Ensembl Protein Viewer:ENSP00000414861.2Re-query CCDS DB by Nucleotide ID:ENST00000443648Re-query CCDS DB by Protein ID:ENSP00000414861
Original member Current member EBI ENST00000651767.1 ENSP00000498362.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651767.1Link to Ensembl Protein Viewer:ENSP00000498362.1Re-query CCDS DB by Nucleotide ID:ENST00000651767Re-query CCDS DB by Protein ID:ENSP00000498362
Original member Current member NCBI NM_001032381.2 NP_001027553.1 Accepted alive Link to Nucleotide Sequence:NM_001032381.2Link to Protein Sequence:NP_001027553.1Re-query CCDS DB by Nucleotide ID:NM_001032381Re-query CCDS DB by Protein ID:NP_001027553Link to BLAST:NP_001027553.1
Original member Current member NCBI NM_001032382.2 NP_001027554.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001032382.2Link to Protein Sequence:NP_001027554.1Re-query CCDS DB by Nucleotide ID:NM_001032382Re-query CCDS DB by Protein ID:NP_001027554Link to BLAST:NP_001027554.1
Original member Current member NCBI NM_001032383.2 NP_001027555.1 Accepted alive Link to Nucleotide Sequence:NM_001032383.2Link to Protein Sequence:NP_001027555.1Re-query CCDS DB by Nucleotide ID:NM_001032383Re-query CCDS DB by Protein ID:NP_001027555Link to BLAST:NP_001027555.1
Original member Current member NCBI NM_001032384.1 NP_001027556.1 Accepted alive Link to Nucleotide Sequence:NM_001032384.1Link to Protein Sequence:NP_001027556.1Re-query CCDS DB by Nucleotide ID:NM_001032384Re-query CCDS DB by Protein ID:NP_001027556Link to BLAST:NP_001027556.1
Original member Current member NCBI NM_005710.2 NP_005701.1 Accepted alive Link to Nucleotide Sequence:NM_005710.2Link to Protein Sequence:NP_005701.1Re-query CCDS DB by Nucleotide ID:NM_005710Re-query CCDS DB by Protein ID:NP_005701Link to BLAST:NP_005701.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001027553.1 265 O60828-1 265 100% 0 0
NP_001027554.1 265 O60828-1 265 100% 0 0
NP_001027555.1 265 O60828-1 265 100% 0 0
NP_001027556.1 265 O60828-1 265 100% 0 0
NP_005701.1 265 O60828-1 265 100% 0 0

Chromosomal Locations for CCDS 14309.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48898510 48898576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48901190 48901301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48901930 48902042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48902233 48902517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48902732 48902795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48902928 48903084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGCCGCTGCCCGTTGCGCTGCAGACCCGCTTGGCCAAGAGAGGCATCCTCAAACATCTGGAGCCTGAAC
CAGAGGAAGAGATCATTGCCGAGGACTATGACGATGATCCTGTGGACTACGAGGCCACCAGGTTGGAGGG
CCTACCACCAAGCTGGTACAAGGTGTTCGACCCTTCCTGCGGGCTCCCTTACTACTGGAATGCAGACACA
GACCTTGTATCCTGGCTCTCCCCACATGACCCCAACTCCGTGGTTACCAAATCGGCCAAGAAGCTCAGAA
GCAGTAATGCAGATGCTGAAGAAAAGTTGGACCGGAGCCATGACAAGTCGGACAGGGGCCATGACAAGTC
GGACCGCAGCCATGAGAAACTAGACAGGGGCCACGACAAGTCAGACCGGGGCCACGACAAGTCTGACAGG
GATCGAGAGCGTGGCTATGACAAGGTAGACAGAGAGAGAGAGCGAGACAGGGAACGGGATCGGGACCGCG
GGTATGACAAGGCAGACCGGGAAGAGGGCAAAGAACGGCGCCACCATCGCCGGGAGGAGCTGGCTCCCTA
TCCCAAGAGCAAGAAGGCAGTAAGCCGAAAGGATGAAGAGTTAGACCCCATGGACCCTAGCTCATACTCA
GACGCCCCCCGGGGCACGTGGTCAACAGGACTCCCCAAGCGGAATGAGGCCAAGACTGGCGCTGACACCA
CAGCAGCTGGGCCCCTCTTCCAGCAGCGGCCGTATCCATCCCCAGGGGCTGTGCTCCGGGCCAATGCAGA
GGCCTCCCGAACCAAGCAGCAGGATTGA

Translation (265 aa):
MPLPVALQTRLAKRGILKHLEPEPEEEIIAEDYDDDPVDYEATRLEGLPPSWYKVFDPSCGLPYYWNADT
DLVSWLSPHDPNSVVTKSAKKLRSSNADAEEKLDRSHDKSDRGHDKSDRSHEKLDRGHDKSDRGHDKSDR
DRERGYDKVDRERERDRERDRDRGYDKADREEGKERRHHRREELAPYPKSKKAVSRKDEELDPMDPSSYS
DAPRGTWSTGLPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRANAEASRTKQQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH