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Report for CCDS37216.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37216.1 Public Mus musculus 15 Krt80 23 108 98 CCDS HistoryNCBI Gene:74127Re-query CCDS DB by CCDS ID:37216.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37216.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077196.5 ENSMUSP00000076437.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077196.5Link to Ensembl Protein Viewer:ENSMUSP00000076437.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000077196Re-query CCDS DB by Protein ID:ENSMUSP00000076437
Original member Current member NCBI NM_028770.3 NP_083046.2 Accepted alive Link to Nucleotide Sequence:NM_028770.3Link to Protein Sequence:NP_083046.2Re-query CCDS DB by Nucleotide ID:NM_028770Re-query CCDS DB by Protein ID:NP_083046Link to BLAST:NP_083046.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083046.2 452 Q0VBK2 452 100% 0 0

Chromosomal Locations for CCDS 37216.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101349915 101350039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101350169 101350224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101350996 101351216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101351674 101351799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101352177 101352341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101358647 101358742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101359480 101359540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101364210 101364418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101369755 101370054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1359 nt):
ATGGCCTACCGCTCCTGCGTCGTTGGCTTCAGCAGCCTCAGCGGCTGTGAGATGACCCCTGCGGGCAGTC
CCCAGCCTGGGACCTCAGGATGGGGCAGCTGTGGGCTCCCTGGGCCTGGCTTCAGCTCTCGAAGCCTCAC
AAGCTGCAGGCCAGCTGGCACCATCCCCAAGGTGACTGTGAACCCCAGCCTGCTGGTGCCTCTGGACCTC
AAGGTGGATCCAGCTGTTCAACAGCAGAAGAATCAAGAAAAGGAGGAGATGAAGGCTCTCAATGATAAAT
TTGCCTCCCTGATTGGCAAGGTCCAAGCTCTGGAGCAACGCAACCAACTGCTGGAGACCCGATGGAGCTT
CCTGCAGGGCCAGGGATCAGCCACCTTCGACCTCAGCCACCATTATGAGACATTCCAGGGCCGGCTGCAG
GAGGAGCTTCGTAAAGTGAGCCAAGAGCGGGGACAGCTGGAGGCCAACCTGTTGCAGGTGTTAGAGAAGG
TGGAGGAGTTTCGCGTCAGGTATGAGGACGAGATCTCCAAGCGCACAGACCTGGAGTTTACCTTTGTCCA
GCTGAAGAAGGACCTGGATGCTGAGTGTCTCCGAAGAACTGAACTGGAAACCAAACTGAAGGGCCTGCAG
GGCTTCCTAGAGCTGATGAGAACAGTCTATGAGCAGGAGCTGAAAGACCTTACAGCCCAAGTGAAGGACG
TGTCTGTGACTGTGGGCCTGGACAGCCGCTGCCACATCGACCTGAGCGGCATCGTGGAGGAAGTGAAGGC
CCAGTATGACGCCATCGCTGCTCGAAGCCTGGAGGAGGCTGAAGCATATTCACGGAGCCAGCTTGAGGAG
CGAGCTGCCCGCTCAGCGGAGTTCGGGAACAGCCTCCAAAGCAGCCGCTGTGAGATTGCAGACCTCAACG
TGCGCATCCAGAAGCTGCGGTCTCAGATCGTCTCCGTCAAGAGCCATTGCCTAAAACTGGAGGAGAACAT
CAAGGTGGCTGAGGAGCAAGGAGAACTGGCCTTCCAGGACGCCAAGGACAAGATGGCCCAGCTGGAGAAT
GCCCTGCAGAAGGCCAAGCAGGACATGGCCCGGCAGTTGCGCGAGTATCAGGATCTCATGAACACCAAGC
TGGCTCTGGACATAGAGATAGCCACCTACCACAAGCTGATGGAAGGAGAAGAAAGCCGGATGGACCTGCC
TTCTGCCACTGTGGTCAGTACTGTGAAATCTGGATGCAGAACCACTGCCTCCAAGTCTGGCCTCACCAAG
ACCTCCTCCCGGAAGAAGAAGAACCGCAGAGGCCCAGTGATCAAGATCACTGAGATGTCAGAGAAATATC
TCTCCCAGGAATCAGAGGCCTCAGAGTAA

Translation (452 aa):
MAYRSCVVGFSSLSGCEMTPAGSPQPGTSGWGSCGLPGPGFSSRSLTSCRPAGTIPKVTVNPSLLVPLDL
KVDPAVQQQKNQEKEEMKALNDKFASLIGKVQALEQRNQLLETRWSFLQGQGSATFDLSHHYETFQGRLQ
EELRKVSQERGQLEANLLQVLEKVEEFRVRYEDEISKRTDLEFTFVQLKKDLDAECLRRTELETKLKGLQ
GFLELMRTVYEQELKDLTAQVKDVSVTVGLDSRCHIDLSGIVEEVKAQYDAIAARSLEEAEAYSRSQLEE
RAARSAEFGNSLQSSRCEIADLNVRIQKLRSQIVSVKSHCLKLEENIKVAEEQGELAFQDAKDKMAQLEN
ALQKAKQDMARQLREYQDLMNTKLALDIEIATYHKLMEGEESRMDLPSATVVSTVKSGCRTTASKSGLTK
TSSRKKKNRRGPVIKITEMSEKYLSQESEASE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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