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Report for CCDS6735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6735.1 Public Homo sapiens 9 CORO2A 24 110 108 CCDS HistoryNCBI Gene:7464Re-query CCDS DB by CCDS ID:6735.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6735.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343933.9 ENSP00000343746.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343933.9Link to Ensembl Protein Viewer:ENSP00000343746.5Re-query CCDS DB by Nucleotide ID:ENST00000343933Re-query CCDS DB by Protein ID:ENSP00000343746
Original member Current member EBI ENST00000375077.5 ENSP00000364218.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375077.5Link to Ensembl Protein Viewer:ENSP00000364218.4Re-query CCDS DB by Nucleotide ID:ENST00000375077Re-query CCDS DB by Protein ID:ENSP00000364218
Original member Current member NCBI NM_003389.3 NP_003380.3 Accepted alive Link to Nucleotide Sequence:NM_003389.3Link to Protein Sequence:NP_003380.3Re-query CCDS DB by Nucleotide ID:NM_003389Re-query CCDS DB by Protein ID:NP_003380Link to BLAST:NP_003380.3
Original member Current member NCBI NM_052820.4 NP_438171.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052820.4Link to Protein Sequence:NP_438171.1Re-query CCDS DB by Nucleotide ID:NM_052820Re-query CCDS DB by Protein ID:NP_438171Link to BLAST:NP_438171.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003380.3 525 Q92828 525 100% 0 0
NP_438171.1 525 Q92828 525 100% 0 0

Chromosomal Locations for CCDS 6735.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 98124774 98124905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98126549 98126823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98128170 98128260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98128607 98128719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98129794 98129890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98130955 98131059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98132185 98132301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98133038 98133217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98134806 98134955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98137572 98137688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98157460 98157660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1578 nt):
ATGTCATGGCACCCCCAGTACCGGAGCTCCAAGTTCCGTCATGTCTTTGGCAAACCAGCCAGCAAGGAGA
ACTGCTACGACTCCGTGCCTATCACCCGCAGCGTTCACGACAACCACTTCTGTGCCGTGAACCCCCACTT
CATTGCAGTTGTGACTGAGTGTGCTGGTGGAGGGGCCTTCCTCGTCATCCCCCTGCACCAGACAGGGAAG
TTGGACCCCCACTACCCAAAAGTCTGCGGGCACAGAGGCAACGTTTTGGATGTCAAGTGGAACCCTTTTG
ATGATTTTGAGATCGCCTCCTGTTCTGAAGATGCCACAATTAAGATCTGGAGCATCCCCAAGCAGCTGCT
GACCAGGAACCTCACGGCCTACAGGAAGGAACTCGTGGGCCACGCGCGCAGAGTAGGCCTGGTGGAGTGG
CACCCCACGGCCGCCAACATCCTCTTCAGTGCTGGCTATGACTACAAGGTGATGATCTGGAACCTGGATA
CAAAGGAGTCTGTCATCACAAGCCCCATGAGTACGATTAGCTGTCACCAAGATGTGATCCTCTCCATGTC
CTTCAACACCAACGGCAGCCTGTTGGCCACCACCTGCAAAGACCGCAAGATTCGGGTTATTGACCCCCGA
GCAGGGACCGTCCTCCAGGAGGCCAGCTACAAAGGGCACCGGGCCAGCAAAGTGCTGTTTCTGGGGAACC
TGAAGAAGCTGATGTCCACAGGCACATCCCGATGGAACAACCGGCAGGTGGCCTTGTGGGACCAGGATAA
CCTCTCTGTGCCTCTGATGGAGGAGGACCTGGACGGCTCCTCGGGCGTGCTGTTTCCCTTCTATGACGCG
GACACCAGCATGCTCTACGTGGTGGGGAAGGGAGATGGCAACATCCGCTACTACGAGGTGAGCGCCGACA
AGCCTCACCTGAGCTACCTGACTGAGTACCGCTCCTATAACCCACAGAAGGGGATCGGTGTCATGCCAAA
GAGAGGACTCGACGTGTCCTCCTGCGAGATCTTCCGCTTCTACAAGCTGATCACAACCAAAAGCCTCATC
GAGCCCATCTCCATGATTGTGCCCCGGCGGTCAGAATCCTACCAAGAGGACATATACCCTCCAACAGCAG
GGGCCCAGCCCTCCCTGACGGCCCAGGAGTGGCTCAGCGGGATGAATCGAGACCCAATCCTGGTGTCCCT
TAGGCCTGGCTCTGAGCTGCTGAGACCCCACCCACTGCCTGCAGAGAGACCTATCTTCAATTCCATGGCC
CCAGCCTCACCCCGGCTCTTGAATCAGACAGAAAAGCTGGCTGCAGAAGATGGCTGGAGGTCTTCCTCCC
TGTTGGAGGAGAAGATGCCAAGGTGGGCAGCAGAACACAGGCTGGAGGAGAAGAAAACCTGGCTGACAAA
TGGCTTTGACGTTTTCGAATGCCCCCCACCAAAGACAGAGAATGAGTTGCTGCAGATGTTCTACCGGCAA
CAGGAGGAGATCCGAAGGCTCCGGGAGCTGTTGACCCAGCGAGAGGTCCAGGCCAAACAGTTGGAACTGG
AGATCAAAAACTTGCGGATGGGCTCAGAGCAGCTCTGA

Translation (525 aa):
MSWHPQYRSSKFRHVFGKPASKENCYDSVPITRSVHDNHFCAVNPHFIAVVTECAGGGAFLVIPLHQTGK
LDPHYPKVCGHRGNVLDVKWNPFDDFEIASCSEDATIKIWSIPKQLLTRNLTAYRKELVGHARRVGLVEW
HPTAANILFSAGYDYKVMIWNLDTKESVITSPMSTISCHQDVILSMSFNTNGSLLATTCKDRKIRVIDPR
AGTVLQEASYKGHRASKVLFLGNLKKLMSTGTSRWNNRQVALWDQDNLSVPLMEEDLDGSSGVLFPFYDA
DTSMLYVVGKGDGNIRYYEVSADKPHLSYLTEYRSYNPQKGIGVMPKRGLDVSSCEIFRFYKLITTKSLI
EPISMIVPRRSESYQEDIYPPTAGAQPSLTAQEWLSGMNRDPILVSLRPGSELLRPHPLPAERPIFNSMA
PASPRLLNQTEKLAAEDGWRSSSLLEEKMPRWAAEHRLEEKKTWLTNGFDVFECPPPKTENELLQMFYRQ
QEEIRRLRELLTQREVQAKQLELEIKNLRMGSEQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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