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Report for CCDS21006.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21006.1 Public Mus musculus 7 Cyp2b19 23 108 98 CCDS HistoryNCBI Gene:13090Re-query CCDS DB by CCDS ID:21006.1Re-query CCDS DB by GeneID:13090See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21006.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000077855.7 ENSMUSP00000077021.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000077855.7Link to Ensembl Protein Viewer:ENSMUSP00000077021.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000077855Re-query CCDS DB by Protein ID:ENSMUSP00000077021
Original member Current member NCBI NM_007814.2 NP_031840.1 Accepted alive Link to Nucleotide Sequence:NM_007814.2Link to Protein Sequence:NP_031840.1Re-query CCDS DB by Nucleotide ID:NM_007814Re-query CCDS DB by Protein ID:NP_031840Link to BLAST:NP_031840.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031840.1 492 O55071 492 100% 0 0

Chromosomal Locations for CCDS 21006.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 26757187 26757360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26759036 26759198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26759341 26759490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26762244 26762404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26763343 26763519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26764250 26764391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26766741 26766928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26767104 26767245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 26771233 26771414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1479 nt):
ATGGAATTCAGTGTGCTGCTCCTTCTCGCTCTCACCACAGGCTTCTTGATATTCTTAGTCAGCCAAAGTC
AGCCAAAGACCCATGGCCACTTCCCACCAGGACCTCGTCCCCTGCCCTTCTTGGGTAACCTCTTGCAGAT
GGACAGACGGGGCCTTCTGAGCTCTTTCATACAGCTTCAAGAAAAATATGGAGATGTGTTCACAGTACAC
CTGGGACCGAGGCCCGTGGTCATGTTGTGCGGGACAGACACCATAAGGGAAGCTCTGGTGAACCAAGCTG
AGGCTTTCTCTGGCCGAGGGACAGTTGCTGTGCTTGATCCAATTGTTCAGGGATATGGTGTGATCTTTTC
CAGTGGGGAACGTTGGAAAACCCTTCGGCGATTCTCTCTGGCCACCATGAGAGACTTTGGGATGGGAAAG
CGGAGTGTGGAGGAGCGGATAAAGGAAGAGGCCCAATGTTTGGTGGAGGAACTGAAGAAATACAAGGGAG
CCCCTCTGAACCCCACCTTCTACTTCCAGTGCATCGTAGCAAATATCATCTGCTCCATTGTCTTTGGAGA
GCGCTTTGACTACAAAGACCACCAATTCCTGCATCTGCTAAATCTGATCTACCAGACATTTTCCCTCATG
AGCTCATTGTCCAGCCAGGTGTTTGAGCTCTTCTCTGCCATCCTGAAGTACTTTCCTGGTGCCCACAGAC
AAATCTCCAAAAACCTGCAGGAAATCCTTGACTACATTGGCCATAGTGTGGAGAAGCACAGGGCCACCTT
GGACCCCAGTGCTCCACGAGACTTCATTGATACCTACCTTCTGCGCATGGAGAAGGAGAAGTCCAACCAC
CATACAGAGTTCCATCACCAGAACCTCGTGATCTCTGTGCTCTCTCTGTTCTTTGCTGGCACCGAGACCA
CCAGCACCACGCTCCGTTACAGCTTCCTGATCATGCTCAAGTACCCCCATGTCGCAGAGAAAGTCCAAAA
GGAGATTGATCAGGTGATCGGCTCACACCGGCTACCGACTCTTGATGATAGAACCAAAATGCCATACACT
GATGCAGTCATCCATGAGATTCAGAGATTTACAGATCTTGCTCCGATTGGTCTACCACACAAAGTCACCA
AAGACACACTGTTCCGAGGATACCTGATCCCCAAGAACACTGAGGTGTACCCCATCCTGAGTTCAGCTCT
TCATGACCCACGGTACTTTGAACAACCAGACAGCTTCAATCCTGAGCACTTCCTGGATGCCAATGGGGCA
CTGAAGACAAATGAAGCTTTCATGCCCTTCTCCACAGGAAAGCGCATTTGTCTTGGAGAAGGCATTGCCC
GCAATGAATTGTTCCTTTTCTTCACCACCATCCTCCAGAACTTCTCTTTGGCCAGCCCTGTAGCTCCTGA
GAACATTGACCTCATTCCCAATAACAGTGGTGCAACCAAAACACCCCCACAGTACCAGATTCACTTCTTG
TCCCGTTGA

Translation (492 aa):
MEFSVLLLLALTTGFLIFLVSQSQPKTHGHFPPGPRPLPFLGNLLQMDRRGLLSSFIQLQEKYGDVFTVH
LGPRPVVMLCGTDTIREALVNQAEAFSGRGTVAVLDPIVQGYGVIFSSGERWKTLRRFSLATMRDFGMGK
RSVEERIKEEAQCLVEELKKYKGAPLNPTFYFQCIVANIICSIVFGERFDYKDHQFLHLLNLIYQTFSLM
SSLSSQVFELFSAILKYFPGAHRQISKNLQEILDYIGHSVEKHRATLDPSAPRDFIDTYLLRMEKEKSNH
HTEFHHQNLVISVLSLFFAGTETTSTTLRYSFLIMLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYT
DAVIHEIQRFTDLAPIGLPHKVTKDTLFRGYLIPKNTEVYPILSSALHDPRYFEQPDSFNPEHFLDANGA
LKTNEAFMPFSTGKRICLGEGIARNELFLFFTTILQNFSLASPVAPENIDLIPNNSGATKTPPQYQIHFL
SR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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