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Report for CCDS36424.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36424.1 Public Mus musculus 12 Kidins220 23 108 98 CCDS HistoryNCBI Gene:77480Re-query CCDS DB by CCDS ID:36424.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36424.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066652.6 ENSMUSP00000063999.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066652.6Link to Ensembl Protein Viewer:ENSMUSP00000063999.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000066652Re-query CCDS DB by Protein ID:ENSMUSP00000063999
Original member NCBI NM_001081378.1 NP_001074847.1 Updated not alive Link to Nucleotide Sequence:NM_001081378.1Link to Protein Sequence:NP_001074847.1Re-query CCDS DB by Nucleotide ID:NM_001081378Re-query CCDS DB by Protein ID:NP_001074847
Current member NCBI NM_001081378.2 NP_001074847.1 Accepted alive Link to Nucleotide Sequence:NM_001081378.2Link to Protein Sequence:NP_001074847.1Re-query CCDS DB by Nucleotide ID:NM_001081378Re-query CCDS DB by Protein ID:NP_001074847Link to BLAST:NP_001074847.1

Chromosomal Locations for CCDS 36424.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 24982270 24982377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24986904 24987002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24988532 24988630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24989738 24989836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24990676 24990774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24992210 24992308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24994812 24995009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24997232 24997330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24998706 24998804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 24999261 24999359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25001573 25001750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25002989 25003153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25003944 25004123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25005053 25005218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25008059 25008210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25008403 25008692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25010072 25010212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25010895 25011138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25011500 25011588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25013297 25013441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25016890 25017052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25036454 25036632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25038324 25038550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25040456 25040569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25041246 25041302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25046203 25046235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25047894 25047926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25051095 25051226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25052797 25052895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25053798 25054034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 25056582 25057841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5382 nt):
ATGTCGGTTCTTATATCACAGAGTGTGATAAATTATGTGGAAGAAGAGAATATTCCTGCTCTGAAAGCCC
TTCTTGAGAAGTGCAAAGATGTAGATGAGAGGAACGAGTGTGGCCAGACGCCACTGATGATAGCTGCTGA
ACAGGGCAATGTGGAAATAGTGAAAGAACTCATTAAGAATGGAGCCAACTGCAACCTGGAAGACCTGGAT
AACTGGACTGCGCTTATATCAGCATCTAAAGAGGGGCACATCCACATTGTGGAAGAGCTGCTGAAGTGTG
GGGCCAATCTGGAGCACCGTGACATGGGGGGATGGACAGCTCTCATGTGGGCGTGCTACAAAGGCAGGAC
GGATGTTGTGGAGTTGCTTCTTTCTCATGGTGCCAACCCAAGTGTCACTGGTTTGTACAGTGTCTACCCA
ATCATCTGGGCAGCGGGCAGAGGCCACGCCGACATAGTGCATCTTCTGCTGCAGAATGGTGCGAAAGTCA
ATTGCTCTGATAAGTATGGAACAACTCCTTTGGTGTGGGCTGCCCGAAAGGGTCATTTGGAATGTGTGAA
GCATTTGTTGGCCATGGGAGCTGATGTTGATCAAGAAGGAGCTAATTCGATGACTGCACTGATTGTGGCA
GTGAAAGGGGGCTACACACAGTCAGTGAAGGAGATTCTGAAAAGGAATCCAAACGTGAACCTGACTGATA
AGGACGGAAACACAGCCCTGATGATTGCGTCGAAGGAGGGACATATAGAAATTGTGCAGGACCTGTTGGA
CGCCGGAACATACGTGAACATACCTGACAGGAGTGGGGATACTGTATTGATTGGCGCTGTGAGAGGTGGT
CATGTTGAAATTGTTCGAGCACTTCTCCAAAAATACGCTGATATAGACATTAGAGGGCAGGACAATAAGA
CTGCACTGTATTGGGCTGTTGAGAAAGGCAATGCGACAATGGTGAGAGATATCCTGCAGTGCAATCCTGA
TACGGAAATATGCACGAAGGATGGCGAGACACCACTAATAAAGGCCACCAAGATGAGAAATATTGAAGTG
GTGGAGCTGCTGCTGGATAAGGGGGCTAGGGTGTCTGCTGTGGACAAGAAAGGTGACACTCCCCTGCACG
TTGCCATCCGAGGGAGGAGCCGGAGACTGGCAGAACTTCTTTTACGGAACCCCAAAGATGGACGGTTACT
TTACAGGCCCAACAAAGCAGGCGAGACTCCCTACAACATTGACTGCAGCCACCAGAAAAGCATTTTAACT
CAAATATTTGGAGCCAGACACTTGTCTCCTACGGAAACAGACGGTGACATGCTTGGTTACGATTTGTATA
GCAGCGCCCTGGCAGATATTCTCAGTGAGCCCACCATGCAGCCACCCATCTGTGTGGGCTTGTATGCACA
GTGGGGAAGTGGGAAGTCCTTCTTACTCAAGAAACTAGAAGATGAAATGAAGACGTTTGCAGGGCAGCAG
ATTGAGCCCCTTTTCCAGTTCTCGTGGCTCATCGTGTTCCTCATCCTGCTGCTGTGTGGGGGGCTCGGCC
TGGTGTTTGCTTTCACAGTTGATACAAACCTCGCCATAGCGGTTTCATTGAGTTTCCTAGCTCTCTTATA
CATATTCTTCATCGTCATTTACTTCGGTGGACGGCAGGAAGGAGAGAGTTGGAACTGGGCCTGGGCTCTC
AGCACCAGACTGGCAAGGCACATTGGGTACCTGGAGCTCCTCTTCAAGCTGATGTTTGTGAACCCACCCG
AACTACCAGAGCAAACGACAAAGGCTTTGCCTGTGAGGTTTCTGTTTACAGATTACAATAGACTCTCCAG
TGTTGGGGGAGAGACTTCCTTGGCTGAAATGATCGCGACCCTCTCAGATGCTTGTGAGAGAGAATTCGGC
TTTCTGGCTACCCGGCTGTTTCGAGTATTTAAGACTGAAGATTCTCAGGGTAAAAAGAAATGGAAAAAAA
CATGCTGTCTCCCGTCTTTTATAATCTTTCTTTTTATTGTTGGCTGCATTATTGCTGGAATTACTCTTTT
GGCTATATTCCGAGTTGACCCAAAACATCTGACAGTGAATGCTATCCTCATATCCATTGCATCTATCGTG
GGGTTGGCCTTTGTGCTGAACTGTCGAACATGGTGGCAAGTGCTGGACTCTCTCCTGAATTCTCAGAGAA
AACGCCTCCATAGTGCTGCCTCCAAATTACATAAGCTGAAAAGTGAAGGATTCATGAAAGTCCTGAAGTG
TGAGGTGGAGCTGATGGCCAGGATGGCCAAGACCATCGACAGCTTCACGCAGAATCAGACGAGGCTGGTG
GTTATCATTGACGGCCTGGACGCCTGTGAGCAAGATAAAGTGCTGCAGATGCTGGACACTGTCCGAGTTC
TGTTTTCAAAGGGCCCTTTTATTGCCATTTTTGCAAGTGATCCACATATTATTATAAAGGCCATCAACCA
GAACCTGAATAGTGTGCTTCGTGATTCAAATATAAATGGACATGACTATATGCGCAATATAGTTCATTTA
CCAGTTTTCCTTAATAGTCGTGGGCTTAGCAATGCAAGAAAATTTCTTGTAACTTCAGCAACAAATGGGG
ACATTTCGTGCTCAGAAGCAACAGGAGTGCAGGAGGATGCTGACAGAAGAGTTTCACAGAACAGCCTTGG
GGAGATGACAAAGCTTGGTAGCAAAACGGCCCTCAACAGAAGGGATACTTACCGCAGAAGGCAGATGCAG
AGAACCATCACGAGGCAGATGTCCTTTGATCTCACAAAGCTGCTGGTTACTGAGGATTGGTTCAGTGACA
TCAGTCCACAAACCATGAGACGGTTACTCAATATTGTTTCGGTGACAGGGCGGCTACTAAGAGCCAATCA
GATTACTTTCAACTGGGACAGGCTAGCCAGCTGGATCAACCTTACTGAGCAGTGGCCATACCGGACGTCC
TGGCTCATACTATATCTGGGAGAGACTGAAGGTATTCCTGACCAGATGACGCTAAAGACCATCTATGAGA
GAATATCAAAGAATATCCCAACAACTAAAGATGTTGAGCCACTTCTTGAAATTGATGGAGATATAAGAAA
TTTTGAAGTGTTTTTGTCTTCAAGGACTCCAGTTCTTGTGGCTCGAGATGTAAAGACCTTTTTGCCATGC
ACGGTAAACCTGGATCCCAAACTACGGGAGATCATTGCAGATGTTCGAGCTGCAAGAGAACAGATCAACA
TAGGAGGCCTTGCGTATCCCCCGCTCCCTCTGCACGAAGCCCCTCCTCGGCCTCCTTCTGGGTACAGTCA
GCCTGCATCTGTCTGCTCCTCCTCAGCATCTTTCAATGGGCCGTTCCCAGGCGGCGTTGTGTCCCCACAG
CCCCACAGCAGCTACTACAGCGGCCTGTCGGGACCCCAGCACCCTTTCTACAACAGGCCATTCTTTGCCC
CATACCTTTACACGCCAAGGTATTACCCTGGCGGTTCCCAACATCTCATCTCACGTTCATCAGTAAAAAC
GAGTTTGCCCAGAGATCAGAACAATGGCCTAGAGGTAATCAAGGAGGATGCTGCTGAGGGCCTTCCTTCA
CCCACAGCCTCCTCGAGGGAGAAGAGCTGGACAAGAAAGCAGCTGATGGAGCTGTGTGACTCTGGGTTTA
ACAAACAGAGACAGGCATCCGTCCCTGCCACAGGCACCTCTCTGTTACTGAGTTCAATGACTGTGGATAT
CGTGTGTGAGAAACTGAGACAGATAGAAGGGCTGGACCAGGGCATGCTGCCTCAGTATTGCACAACCATC
AAAAAGGCAAACATAAATGGCCGGGTATTGGCTCAGTGTAATATTGATGAGCTGAAGAAAGAGATGGCTA
TGAACTTTGGAGACTGGCATCTTTTTAGAAGCATGGTCTTAGAAATGAGAAGTGTGGAAAACCAGGTGGT
CCCCGAAGACCCACGTTTTCTCAATGAAAACTCCAGTGCCCCCGTTGCTCATGGGGAATCTGCTCGCCGC
ACTTCTCACAGTGAACTGCCCCACACGGAGCTTTCCAGCCAGACTCCCTACACCCTGAACTTCAGCTTTG
AAGAACTGAACACGCTTGGCCTAGACGAGGGAGCCCCACGGCACAGTAATCTGAGTTGGCAGTCACAAAC
TCGCAGAACCCCAAGTCTCTCGAGTCTCAATTCCCAGGACTCCAGTATTGAAATTTCAAAGCTTACTGAT
AAGGTGCAGGCCGAGTATAGAGATGCCTATAGAGAGTACATTGCTCAGATGTCCCAGTTAGAAGGGGGCA
CAGGGTCGTCAACAATAAGCGGCAGATCTTCTCCACACAGCACATACTACATAGGTCAGAGTTCTTCAGG
GGGCTCCATTCATTCTAATCTAGAACAAGAAAGGGGGAAGGAGAATGAGCTAAAGCAGGAGGAGGGGCGG
AAGTCATTTTTAATGAAGAGGGGGGATGTCCTAGATTACTCCTCATCAGGGGTGTCCACTAATGAGGCCT
CACCCCTGGACCCCATTACTGAGGAAGATGAGAAATCCGACCAGTCAGGTAGTAAGCTGCTCCCAGGCAA
GAAGTCTTCAGAACGGCCTAGTCTCTTCCAGACAGACTTGAAGCTTAAGGGAAGTGGTCTGCGCTACCAG
AAACTGCCCAGTGATGAAGATGAGTCTGGGACAGAAGAGTCAGATAATACCCCACTGCTCAAAGATGATA
AGGATAAAAAGGCCGAAGGCAAAGCAGAGAGAGTGGCTAAGTCTCCAGAGCACAGCGTCGAGCCTATCAG
AACATTCATCAAAGCAAAAGAGTATTTGTCGGACGCCCTCCTCGACAAGAAAGATTCCTCCGATTCGGGA
GTGAGGTCCAATGAGAGTTCTCCCAACCACTCTCTCCACAATGAGGCAGCGGATGACTCCCAGCTGGAAA
AGGCGAATCTCATCGAGCTTGAAGATGAGGGCCACAGTGGGAAGCGAGGGATGCCACACAGTCTGAGTGG
CCTGCAAGATCCTGTCATAGCTCGGATGTCCATTTGCTCGGAAGACAAGAAAAGCCCCTCTGAGTGCAGC
CTGATCGCTAGCAGCCCTGAAGAAAGCTGGCCTTCGTGCCAGAAGGCCTACAATCTAAACCGAACACCCA
GCACTGTGACTCTGAACAACAACACTGCGCCCACCAACAGAGCCAATCAGAACTTTGATGAGATAGAGGG
AGTCAGGGAAACATCCCAGGTCATTTTGAGGCCTGGGCCCAGTCCCAACCCAACTGCTGTGCAGAATGAA
AACCTGAAGAGCATGGCGCACAAGCGAAGCCAGCGCTCCAGTTACACCAGGCTCTCGAAAGATGCGTCTG
AGCTGCATGCAGCCTCCTCAGATAGCACGGGCTTTGGGGAAGAGAGAGAAAGCATTCTCTGA

Translation (1793 aa):
MSVLISQSVINYVEEENIPALKALLEKCKDVDERNECGQTPLMIAAEQGNVEIVKELIKNGANCNLEDLD
NWTALISASKEGHIHIVEELLKCGANLEHRDMGGWTALMWACYKGRTDVVELLLSHGANPSVTGLYSVYP
IIWAAGRGHADIVHLLLQNGAKVNCSDKYGTTPLVWAARKGHLECVKHLLAMGADVDQEGANSMTALIVA
VKGGYTQSVKEILKRNPNVNLTDKDGNTALMIASKEGHIEIVQDLLDAGTYVNIPDRSGDTVLIGAVRGG
HVEIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQCNPDTEICTKDGETPLIKATKMRNIEV
VELLLDKGARVSAVDKKGDTPLHVAIRGRSRRLAELLLRNPKDGRLLYRPNKAGETPYNIDCSHQKSILT
QIFGARHLSPTETDGDMLGYDLYSSALADILSEPTMQPPICVGLYAQWGSGKSFLLKKLEDEMKTFAGQQ
IEPLFQFSWLIVFLILLLCGGLGLVFAFTVDTNLAIAVSLSFLALLYIFFIVIYFGGRQEGESWNWAWAL
STRLARHIGYLELLFKLMFVNPPELPEQTTKALPVRFLFTDYNRLSSVGGETSLAEMIATLSDACEREFG
FLATRLFRVFKTEDSQGKKKWKKTCCLPSFIIFLFIVGCIIAGITLLAIFRVDPKHLTVNAILISIASIV
GLAFVLNCRTWWQVLDSLLNSQRKRLHSAASKLHKLKSEGFMKVLKCEVELMARMAKTIDSFTQNQTRLV
VIIDGLDACEQDKVLQMLDTVRVLFSKGPFIAIFASDPHIIIKAINQNLNSVLRDSNINGHDYMRNIVHL
PVFLNSRGLSNARKFLVTSATNGDISCSEATGVQEDADRRVSQNSLGEMTKLGSKTALNRRDTYRRRQMQ
RTITRQMSFDLTKLLVTEDWFSDISPQTMRRLLNIVSVTGRLLRANQITFNWDRLASWINLTEQWPYRTS
WLILYLGETEGIPDQMTLKTIYERISKNIPTTKDVEPLLEIDGDIRNFEVFLSSRTPVLVARDVKTFLPC
TVNLDPKLREIIADVRAAREQINIGGLAYPPLPLHEAPPRPPSGYSQPASVCSSSASFNGPFPGGVVSPQ
PHSSYYSGLSGPQHPFYNRPFFAPYLYTPRYYPGGSQHLISRSSVKTSLPRDQNNGLEVIKEDAAEGLPS
PTASSREKSWTRKQLMELCDSGFNKQRQASVPATGTSLLLSSMTVDIVCEKLRQIEGLDQGMLPQYCTTI
KKANINGRVLAQCNIDELKKEMAMNFGDWHLFRSMVLEMRSVENQVVPEDPRFLNENSSAPVAHGESARR
TSHSELPHTELSSQTPYTLNFSFEELNTLGLDEGAPRHSNLSWQSQTRRTPSLSSLNSQDSSIEISKLTD
KVQAEYRDAYREYIAQMSQLEGGTGSSTISGRSSPHSTYYIGQSSSGGSIHSNLEQERGKENELKQEEGR
KSFLMKRGDVLDYSSSGVSTNEASPLDPITEEDEKSDQSGSKLLPGKKSSERPSLFQTDLKLKGSGLRYQ
KLPSDEDESGTEESDNTPLLKDDKDKKAEGKAERVAKSPEHSVEPIRTFIKAKEYLSDALLDKKDSSDSG
VRSNESSPNHSLHNEAADDSQLEKANLIELEDEGHSGKRGMPHSLSGLQDPVIARMSICSEDKKSPSECS
LIASSPEESWPSCQKAYNLNRTPSTVTLNNNTAPTNRANQNFDEIEGVRETSQVILRPGPSPNPTAVQNE
NLKSMAHKRSQRSSYTRLSKDASELHAASSDSTGFGEERESIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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