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Report for CCDS46100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46100.1 Public Homo sapiens 19 ZNF225 24 110 108 CCDS HistoryNCBI Gene:7768Re-query CCDS DB by CCDS ID:46100.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46100.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262894.11 ENSP00000262894.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262894.11Link to Ensembl Protein Viewer:ENSP00000262894.5Re-query CCDS DB by Nucleotide ID:ENST00000262894Re-query CCDS DB by Protein ID:ENSP00000262894
Original member Current member EBI ENST00000590612.1 ENSP00000468686.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590612.1Link to Ensembl Protein Viewer:ENSP00000468686.1Re-query CCDS DB by Nucleotide ID:ENST00000590612Re-query CCDS DB by Protein ID:ENSP00000468686
Original member Current member NCBI NM_001321685.2 NP_001308614.1 Accepted alive Link to Nucleotide Sequence:NM_001321685.2Link to Protein Sequence:NP_001308614.1Re-query CCDS DB by Nucleotide ID:NM_001321685Re-query CCDS DB by Protein ID:NP_001308614Link to BLAST:NP_001308614.1
Original member Current member NCBI NM_013362.4 NP_037494.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013362.4Link to Protein Sequence:NP_037494.2Re-query CCDS DB by Nucleotide ID:NM_013362Re-query CCDS DB by Protein ID:NP_037494Link to BLAST:NP_037494.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308614.1 706 Q9UK10 706 100% 0 0
NP_037494.2 706 Q9UK10 706 100% 0 0

Chromosomal Locations for CCDS 46100.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44115828 44115842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44118188 44118314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44118482 44118574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44130850 44132735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGACCACGTTGAAGGAGGCAGTGACCTTCAAGGACGTGGCTGTGGTCTTCACTGAGGAAGAGCTGAGGC
TGCTGGACCTTGCCCAGAGGAAACTGTACCGAGAAGTGATGCTGGAGAACTTCAGGAACCTGCTCTCAGT
GGGGCATCAATCACTCCACAGAGATACTTTCCACTTCCTAAAGGAAGAAAAGTTTTGGATGATGGAGACA
GCAACCCAAAGAGAAGGGAATTTAGGAGGCAAGATCCAAATGGAGATGGAGACTGTTTCAGAATCAGGAA
CACATGAAGGCTTGTTCAGTCATCAAACCTGGGAACAAATTTCAAGTGACTTAACCAGGTTTCAAGACTC
CATGGTAAACAGCTTTCAGTTCTCCAAACAAGATGATATGCCCTGCCAGGTTGATGCAGGACTATCTATA
ATTCACGTAAGACAGAAACCTTCTGAGGGTAGGACGTGTAAAAAGTCCTTTAGTGATGTCTCCGTCCTTG
ATCTTCATCAACAACTACAGTCAAGAGAGAAGTCTCATACATGTGATGAATGTGGAAAGAGTTTCTGTTA
TAGCTCAGCTCTTCGTATTCATCAGAGAGTTCACATGGGGGAGAAACTCTATAATTGTGATGTGTGTGGT
AAGGAATTCAATCAGAGCTCACATCTGCAAATTCATCAGAGAATCCACACTGGAGAGAAACCATTCAAAT
GTGAGCAGTGTGGGAAAGGCTTTAGTCGTAGATCAGGACTTTATGTTCATCGTAAATTACACACAGGAGT
GAAACCTCATATTTGTGAGAAATGTGGGAAGGCCTTCATTCATGATTCCCAGCTTCAGGAACATCAAAGA
ATCCATACTGGGGAGAAGCCATTCAAATGTGATATATGTTGTAAGAGCTTCCGTAGTAGAGCAAATCTTA
ATAGGCATTCCATGGTTCACATGCGAGAGAAACCATTCAGATGTGATACATGTGGTAAGAGCTTTGGTCT
GAAATCAGCACTTAATAGTCATCGCATGGTCCACACAGGAGAGAAACGGTACAAATGTGAGGAATGTGGA
AAACGCTTCATTTATAGGCAAGATCTTTATAAGCATCAGATAGACCACACAGGGGAGAAGCCATATAATT
GTAAAGAATGTGGAAAGAGCTTCAGATGGGCCTCAGGTCTTTCAAGACATGTGCGAGTCCACAGTGGAGA
GACAACATTCAAATGTGAAGAATGTGGGAAGGGATTTTATACAAATTCACAACGTTATTCTCACCAGAGA
GCGCACAGTGGAGAAAAGCCATATAGATGTGAGGAGTGTGGGAAGGGCTACAAAAGGAGGTTGGATCTTG
ACTTTCATCAGAGGGTCCACAGAGGAGAGAAACCCTATAATTGTAAGGAATGTGGGAAGAGCTTTGGCTG
GGCCTCGTGTCTTTTGAATCATCAGAGAATCCACAGTGGAGAAAAACCATTTAAATGTGAAGAATGTGGG
AAAAGATTTACTCAGAATTCACAACTTTATACCCATCGTAGAGTCCACAGTGGAGAAAAACCATTCAAAT
GTGAAGAGTGTGGGAAAAGATTTACTCAGAATTCACAACTTTATTCTCATCGCAGAGTCCACACTGGAGT
AAAGCCATACAAATGTGAAGAGTGTGGGAAGGGCTTCAACAGTAAGTTTAATCTTGACATGCACCAGAGG
GTCCACACCGGAGAGAGACCTTATAATTGTAAAGAATGTGGGAAGAGCTTTAGCCGGGCCTCAAGTATTT
TGAATCATAAGAGACTCCATGGTGATGAAAAGCCATTCAAATGTGAAGAGTGTGGGAAGAGATTTACTGA
GAATTCACAGCTTCATTCCCATCAGAGGGTTCACACTGGGGAAAAGCCATACAAATGTGAGAAGTGTGGA
AAGAGCTTCAGATGGGCCTCAACTCATCTAACCCATCAGAGACTCCACAGTAGAGAAAAACTACTTCAAT
GTGAGGACTGTGGGAAGAGCATTGTGCACAGTTCATGCCTTAAAGACCAACAAAGAGACCAAAGTGGAGA
GAAAACATCTAAATGTGAGGACTGTGGGAAGCGCTACAAGAGGCGCTTGAATCTTGATACGCTTTTGTCA
TTATTTTTAAATGACACATAA

Translation (706 aa):
MTTLKEAVTFKDVAVVFTEEELRLLDLAQRKLYREVMLENFRNLLSVGHQSLHRDTFHFLKEEKFWMMET
ATQREGNLGGKIQMEMETVSESGTHEGLFSHQTWEQISSDLTRFQDSMVNSFQFSKQDDMPCQVDAGLSI
IHVRQKPSEGRTCKKSFSDVSVLDLHQQLQSREKSHTCDECGKSFCYSSALRIHQRVHMGEKLYNCDVCG
KEFNQSSHLQIHQRIHTGEKPFKCEQCGKGFSRRSGLYVHRKLHTGVKPHICEKCGKAFIHDSQLQEHQR
IHTGEKPFKCDICCKSFRSRANLNRHSMVHMREKPFRCDTCGKSFGLKSALNSHRMVHTGEKRYKCEECG
KRFIYRQDLYKHQIDHTGEKPYNCKECGKSFRWASGLSRHVRVHSGETTFKCEECGKGFYTNSQRYSHQR
AHSGEKPYRCEECGKGYKRRLDLDFHQRVHRGEKPYNCKECGKSFGWASCLLNHQRIHSGEKPFKCEECG
KRFTQNSQLYTHRRVHSGEKPFKCEECGKRFTQNSQLYSHRRVHTGVKPYKCEECGKGFNSKFNLDMHQR
VHTGERPYNCKECGKSFSRASSILNHKRLHGDEKPFKCEECGKRFTENSQLHSHQRVHTGEKPYKCEKCG
KSFRWASTHLTHQRLHSREKLLQCEDCGKSIVHSSCLKDQQRDQSGEKTSKCEDCGKRYKRRLNLDTLLS
LFLNDT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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