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Report for CCDS49823.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49823.1 Public Mus musculus 16 Acap2 23 108 98 CCDS HistoryNCBI Gene:78618Re-query CCDS DB by CCDS ID:49823.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49823.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000230614.1 ENSMUSP00000154983.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000230614.1Link to Ensembl Protein Viewer:ENSMUSP00000154983.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000230614Re-query CCDS DB by Protein ID:ENSMUSP00000154983
Original member Current member NCBI NM_030138.2 NP_084414.1 Accepted alive Link to Nucleotide Sequence:NM_030138.2Link to Protein Sequence:NP_084414.1Re-query CCDS DB by Nucleotide ID:NM_030138Re-query CCDS DB by Protein ID:NP_084414Link to BLAST:NP_084414.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084414.1 770 Q6ZQK5-1 770 100% 0 0

Chromosomal Locations for CCDS 49823.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31096346 31096446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31101825 31101886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31103499 31103609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31104845 31104954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31105485 31105672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31107050 31107142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31108027 31108187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31109641 31109732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31110501 31110570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31110893 31111101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31116002 31116107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31117258 31117358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31119396 31119447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31127321 31127433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31131260 31131334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31133529 31133624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31136537 31136581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31139471 31139654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31141739 31141797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31153706 31153759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31154573 31154692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31160331 31160388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31200939 31200991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2313 nt):
ATGAAGATGACGGTGGATTTCGAGGAGTGTCTGAAGGACTCGCCCCGCTTCAGGGCTGCTTTGGAAGAGG
TAGAAGGAGATGTGGCTGAGCTGGAACTAAAACTCGACAAGCTTGTGAAACTGTGTATCGCGATGATTGA
CACTGGCAAAGCCTTTTGTGTTGCAAATAAACAGTTCATGAATGGGATCCGAGACCTGGCCCAGTATTCT
AGCAATGATGCTGTGGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAGGAAATGATCAATTTCC
ACACAATTCTGTTTGACCAAACCCAGAGATCAATTAAGGCCCAGCTTCAGAACTTTGTCAAAGAAGATCT
TAGAAAATTCAAAGATGCCAAGAAACAATTTGAAAAAGTCAGTGAAGAAAAGGAAAACGCACTAGTAAAA
AATGCCCAAGTTCAAAGAAACAAACAGCACGAGGTTGAAGAGGCTGCAAACATTCTCACGGCCACGCGGA
AATGCTTCCGGCACATAGCGCTTGACTACGTCCTGCAGATCAATGTGCTTCAGTCAAAACGGAGATCGGA
AATCCTGAAATCAATGCTGTCCTTCATGTACGCACATCTGGCCTTCTTCCATCAAGGGTATGACCTGTTC
AGTGAGCTTGGGCCCTACATGAAAGATCTTGGAGCACAGTTGGATCGACTGGTTGTAGATGCAGCAAAGG
AGAAAAGAGAGATGGAGCAAAAACACTCTACGATCCAGCAGAAGGATTTCTCCAGTGACGATTCCAAGCT
AGAGTATAATGTAGACGCTGCAAATGGCATTGTCATGGAAGGGTATCTGTTCAAACGAGCCAGCAACGCC
TTCAAAACGTGGAACAGACGCTGGTTCTCCATACAGAACAATCAGTTGGTTTACCAGAAAAAGTTTAAGG
ACAGCCCCACTGTGGTGGTGGAAGACCTCAGGCTCTGCACAGTGAAGCATTGCGAAGACATCGAGCGGCG
GTTCTGCTTTGAGGTCGTCTCTCCAACAAAAAGTTGTATGCTCCAGGCAGATTCTGAAAAGCTTCGCCAG
GCCTGGATTAAGGCTGTTCAGACCAGTATTGCAACTGCTTATAGAGAGAAGGGCGATGAATCAGAGAAAT
TGGATAAGAAGTCGTCCCCATCAACCGGAAGCCTAGATTCTGGAAATGAATCAAAAGAGAAGTTATTGAA
AGGAGAAAGTGCTCTGCAGCGTGTGCAGTGTATCCCTGGCAACACCAGCTGCTGTGACTGTGGTCTGGCA
GACCCACGGTGGGCCAGCATCAACCTGGGCATTACCTTGTGCATTGAGTGCTCTGGGATTCATCGGAGCC
TTGGGGTTCATTTTTCGAAAGTAAGATCTTTAACTTTAGACACTTGGGAGCCAGAGCTCTTAAAGCTTAT
GTGTGAATTGGGAAATGATGTTATAAATCGAGTTTATGAAGCTAAACTGGAAAAAATGGGTGTAAAGAAA
CCACAGCCAGGACAAAGACAGGAGAAGGAGGCATATATCAGAGCGAAATATGTGGAAAGGAAATTTGTGG
ATAAGTACTCTGCATTGCTGTCTCCGTCTGAGCAGGAAAAAAGGATCATCTCTAAGAGCTGCGAGGACCA
GAGGCTGAGCCATGCCAGAGCATCTGTCCACACCCCAGTCAAAAGTAATGACAGCGGGATCCAGCAATGC
TCTGAGGATGGACGAGAATCTCTACCTTCCACGGTGTCAGCCAATAGCTTATATGAGCCTGAAGGAGAAA
GGCAAGAGTCTTCTGTGTTTCTTGACTCTAAACATCTTAATCCAGGACTTCAGCTTTATAGGGCTTCGTA
CGAAAAAAACCTTCCCAAGATGGCTGAGGCTTTGGCTCACGGTGCAGATGTGAACTGGGCTAATTCAGAT
GAAAACCAAGCAACACCACTCATCCAGGCTGTATTAGGGGGCTCTTTGGTGACATGTGAGTTCCTGTTGC
AGAATGGTGCTAATGTGAACCAAAGAGATGTCCAAGGCCGGGGACCACTGCACCATGCCACCGTCTTAGG
ACACACAGGGCAGGTGTGCTTATTCCTCAAGCGAGGTGCCAATCAACATGCCACTGACGAGGAGGGGAAG
GACCCTCTGAGTATCGCCGTGGAAGCAGCCAACGCTGACATAGTAACCCTGTTACGCTTAGCAAGAATGA
ATGAGGAAATGCGGGAATCAGAAGGACTTTATGGACAGCCAGGTGATGAAACTTACCAGGATATTTTTCG
TGATTTTTCTCAAATGGCATCCAATAATCCAGAGAAACTCAATCGTTTCCAGCAAGATTCACAGAAGTTC
TGA

Translation (770 aa):
MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCVANKQFMNGIRDLAQYS
SNDAVVETSLTKFSDSLQEMINFHTILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKVSEEKENALVK
NAQVQRNKQHEVEEAANILTATRKCFRHIALDYVLQINVLQSKRRSEILKSMLSFMYAHLAFFHQGYDLF
SELGPYMKDLGAQLDRLVVDAAKEKREMEQKHSTIQQKDFSSDDSKLEYNVDAANGIVMEGYLFKRASNA
FKTWNRRWFSIQNNQLVYQKKFKDSPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQ
AWIKAVQTSIATAYREKGDESEKLDKKSSPSTGSLDSGNESKEKLLKGESALQRVQCIPGNTSCCDCGLA
DPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGNDVINRVYEAKLEKMGVKK
PQPGQRQEKEAYIRAKYVERKFVDKYSALLSPSEQEKRIISKSCEDQRLSHARASVHTPVKSNDSGIQQC
SEDGRESLPSTVSANSLYEPEGERQESSVFLDSKHLNPGLQLYRASYEKNLPKMAEALAHGADVNWANSD
ENQATPLIQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRGANQHATDEEGK
DPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMASNNPEKLNRFQQDSQKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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