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Report for CCDS12381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12381.1 Public Homo sapiens 19 KXD1 24 110 108 CCDS HistoryNCBI Gene:79036Re-query CCDS DB by CCDS ID:12381.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12381.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222307.9 ENSP00000222307.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222307.9Link to Ensembl Protein Viewer:ENSP00000222307.3Re-query CCDS DB by Nucleotide ID:ENST00000222307Re-query CCDS DB by Protein ID:ENSP00000222307
Original member Current member EBI ENST00000539106.5 ENSP00000438903.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539106.5Link to Ensembl Protein Viewer:ENSP00000438903.1Re-query CCDS DB by Nucleotide ID:ENST00000539106Re-query CCDS DB by Protein ID:ENSP00000438903
Original member Current member EBI ENST00000540691.5 ENSP00000443549.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540691.5Link to Ensembl Protein Viewer:ENSP00000443549.1Re-query CCDS DB by Nucleotide ID:ENST00000540691Re-query CCDS DB by Protein ID:ENSP00000443549
Original member Current member EBI ENST00000599319.5 ENSP00000468990.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000599319.5Link to Ensembl Protein Viewer:ENSP00000468990.1Re-query CCDS DB by Nucleotide ID:ENST00000599319Re-query CCDS DB by Protein ID:ENSP00000468990
Original member Current member EBI ENST00000595073.5 ENSP00000471554.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595073.5Link to Ensembl Protein Viewer:ENSP00000471554.1Re-query CCDS DB by Nucleotide ID:ENST00000595073Re-query CCDS DB by Protein ID:ENSP00000471554
Original member Current member EBI ENST00000600654.5 ENSP00000472678.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600654.5Link to Ensembl Protein Viewer:ENSP00000472678.1Re-query CCDS DB by Nucleotide ID:ENST00000600654Re-query CCDS DB by Protein ID:ENSP00000472678
Original member Current member EBI ENST00000602094.5 ENSP00000472836.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000602094.5Link to Ensembl Protein Viewer:ENSP00000472836.1Re-query CCDS DB by Nucleotide ID:ENST00000602094Re-query CCDS DB by Protein ID:ENSP00000472836
Original member Current member NCBI NM_001171948.2 NP_001165419.1 Accepted alive Link to Nucleotide Sequence:NM_001171948.2Link to Protein Sequence:NP_001165419.1Re-query CCDS DB by Nucleotide ID:NM_001171948Re-query CCDS DB by Protein ID:NP_001165419Link to BLAST:NP_001165419.1
Original member Current member NCBI NM_001171949.2 NP_001165420.1 Accepted alive Link to Nucleotide Sequence:NM_001171949.2Link to Protein Sequence:NP_001165420.1Re-query CCDS DB by Nucleotide ID:NM_001171949Re-query CCDS DB by Protein ID:NP_001165420Link to BLAST:NP_001165420.1
Original member Current member NCBI NM_024069.4 NP_076974.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024069.4Link to Protein Sequence:NP_076974.2Re-query CCDS DB by Nucleotide ID:NM_024069Re-query CCDS DB by Protein ID:NP_076974Link to BLAST:NP_076974.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165419.1 176 Q9BQD3 176 100% 0 0
NP_001165420.1 176 Q9BQD3 176 100% 0 0
NP_076974.2 176 Q9BQD3 176 100% 0 0

Chromosomal Locations for CCDS 12381.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 18562057 18562157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18564869 18565021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18567132 18567178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 18568402 18568631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (531 nt):
ATGGACCTCCCGGACTCGGCCTCGAGGGTCTTCTGCGGCCGCATCCTGAGCATGGTGAACACAGATGATG
TCAACGCCATCATCCTGGCCCAGAAGAACATGCTGGACCGCTTTGAGAAGACCAATGAGATGCTGCTCAA
CTTCAACAACCTGTCCAGTGCCCGCCTGCAGCAGATGAGCGAACGCTTCCTGCACCACACGAGGACCCTA
GTAGAGATGAAACGGGACCTGGACAGCATCTTCCGCCGTATCAGGACGCTGAAAGGGAAACTGGCCAGGC
AGCACCCAGAGGCCTTCAGCCATATCCCAGAGGCATCCTTCCTGGAGGAAGAGGATGAAGACCCCATCCC
ACCCAGCACCACGACCACCATTGCCACCTCAGAACAGAGCACGGGCTCATGTGACACCAGCCCCGACACC
GTCTCGCCCTCCCTGAGCCCCGGCTTCGAGGACCTGTCCCATGTCCAGCCTGGCTCCCCAGCCATCAACG
GCCGCAGCCAGACAGATGACGAGGAGATGACGGGCGAATAG

Translation (176 aa):
MDLPDSASRVFCGRILSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSARLQQMSERFLHHTRTL
VEMKRDLDSIFRRIRTLKGKLARQHPEAFSHIPEASFLEEEDEDPIPPSTTTTIATSEQSTGSCDTSPDT
VSPSLSPGFEDLSHVQPGSPAINGRSQTDDEEMTGE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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