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Report for CCDS3690.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3690.1 Public Homo sapiens 4 ELOVL6 24 110 108 CCDS HistoryNCBI Gene:79071Re-query CCDS DB by CCDS ID:3690.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3690.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302274.8 ENSP00000304736.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302274.8Link to Ensembl Protein Viewer:ENSP00000304736.3Re-query CCDS DB by Nucleotide ID:ENST00000302274Re-query CCDS DB by Protein ID:ENSP00000304736
Original member Current member EBI ENST00000394607.7 ENSP00000378105.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394607.7Link to Ensembl Protein Viewer:ENSP00000378105.3Re-query CCDS DB by Nucleotide ID:ENST00000394607Re-query CCDS DB by Protein ID:ENSP00000378105
Original member Current member NCBI NM_001130721.2 NP_001124193.1 Accepted alive Link to Nucleotide Sequence:NM_001130721.2Link to Protein Sequence:NP_001124193.1Re-query CCDS DB by Nucleotide ID:NM_001130721Re-query CCDS DB by Protein ID:NP_001124193Link to BLAST:NP_001124193.1
Original member Current member NCBI NM_024090.3 NP_076995.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024090.3Link to Protein Sequence:NP_076995.1Re-query CCDS DB by Nucleotide ID:NM_024090Re-query CCDS DB by Protein ID:NP_076995Link to BLAST:NP_076995.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124193.1 265 Q9H5J4 265 100% 0 0
NP_076995.1 265 Q9H5J4 265 100% 0 0

Chromosomal Locations for CCDS 3690.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 110051338 110051762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 110059603 110059754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 110105497 110105628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 110198247 110198335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGAACATGTCAGTGTTGACTTTACAAGAATATGAATTCGAAAAGCAGTTCAACGAGAATGAAGCCATCC
AATGGATGCAGGAAAACTGGAAGAAATCTTTCCTGTTTTCTGCTCTGTATGCTGCCTTTATATTCGGTGG
TCGGCACCTAATGAATAAACGAGCAAAGTTTGAACTGAGGAAGCCATTAGTGCTCTGGTCTCTGACCCTT
GCAGTCTTCAGTATATTCGGTGCTCTTCGAACTGGTGCTTATATGGTGTACATTTTGATGACCAAAGGCC
TGAAGCAGTCAGTTTGTGACCAGGGTTTTTACAATGGACCTGTCAGCAAATTCTGGGCTTATGCATTTGT
GCTAAGCAAAGCACCCGAACTAGGAGATACAATATTCATTATTCTGAGGAAGCAGAAGCTGATCTTCCTG
CACTGGTATCACCACATCACTGTGCTCCTGTACTCTTGGTACTCCTACAAAGACATGGTTGCCGGGGGAG
GTTGGTTCATGACTATGAACTATGGCGTGCACGCCGTGATGTACTCTTACTATGCCTTGCGGGCGGCAGG
TTTCCGAGTCTCCCGGAAGTTTGCCATGTTCATCACCTTGTCCCAGATCACTCAGATGCTGATGGGCTGT
GTGGTTAACTACCTGGTCTTCTGCTGGATGCAGCATGACCAGTGTCACTCTCACTTTCAGAACATCTTCT
GGTCCTCACTCATGTACCTCAGCTACCTTGTGCTCTTCTGCCATTTCTTCTTTGAGGCCTACATCGGCAA
AATGAGGAAAACAACGAAAGCTGAATAG

Translation (265 aa):
MNMSVLTLQEYEFEKQFNENEAIQWMQENWKKSFLFSALYAAFIFGGRHLMNKRAKFELRKPLVLWSLTL
AVFSIFGALRTGAYMVYILMTKGLKQSVCDQGFYNGPVSKFWAYAFVLSKAPELGDTIFIILRKQKLIFL
HWYHHITVLLYSWYSYKDMVAGGGWFMTMNYGVHAVMYSYYALRAAGFRVSRKFAMFITLSQITQMLMGC
VVNYLVFCWMQHDQCHSHFQNIFWSSLMYLSYLVLFCHFFFEAYIGKMRKTTKAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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