NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58722.1 Public Homo sapiens 2 TMEM185B 24 110 108 CCDS HistoryNCBI Gene:79134Re-query CCDS DB by CCDS ID:58722.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426077.3 ENSP00000453399.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000426077.3Link to Ensembl Protein Viewer:ENSP00000453399.1Re-query CCDS DB by Nucleotide ID:ENST00000426077Re-query CCDS DB by Protein ID:ENSP00000453399
Original member Current member NCBI NM_024121.3 NP_077026.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024121.3Link to Protein Sequence:NP_077026.2Re-query CCDS DB by Nucleotide ID:NM_024121Re-query CCDS DB by Protein ID:NP_077026Link to BLAST:NP_077026.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077026.2 350 Q9H7F4 350 100% 0 0

Chromosomal Locations for CCDS 58722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 120221924 120222976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1053 nt):
ATGAACCCCAGGGGCCTGTTCCAGGACTTCAACCCCAGTAAGTTTCTCATCTACACCTGCCTGCTGCTCT
TCTCGGTGCTGCTGCCCCTCCGCCTGGACGGCATCATCCAATGGAGCTACTGGGCCGTCTTTGCCCCCAT
ATGGCTGTGGAAGCTTCTAGTCGTCGCAGGCGCCTCCGTGGGCGCGGGCGTTTGGGCCCGCAACCCTCGC
TACCGCACCGAGGGAGAGGCCTGTGTGGAGTTCAAAGCCATGCTGATCGCTGTGGGCATCCACCTGCTGC
TGCTCATGTTCGAAGTCCTGGTCTGCGACAGGGTGGAGAGGGGCACCCACTTCTGGCTGCTGGTCTTCAT
GCCTCTCTTCTTCGTGTCCCCCGTGTCCGTGGCTGCCTGCGTCTGGGGCTTTCGACACGATAGGTCGCTG
GAGCTGGAGATCCTGTGCTCGGTCAACATCCTGCAGTTCATCTTCATCGCCCTAAAGCTGGACAGGATTA
TTCACTGGCCGTGGCTGGTGGTGTTTGTGCCCCTGTGGATCCTCATGTCGTTCCTTTGCCTGGTCGTCCT
CTATTACATCGTCTGGTCCCTCCTGTTCCTGCGGTCCCTGGATGTGGTTGCCGAGCAGCGGAGAACACAC
GTGACCATGGCTATCAGTTGGATAACGATTGTCGTGCCTCTGCTCACTTTTGAGGTCCTGCTGGTTCACA
GATTGGATGGCCACAATACATTCTCCTACGTCTCCATATTTGTCCCCCTTTGGCTTTCCTTACTAACTTT
AATGGCCACAACATTTAGGCGAAAGGGGGGCAATCATTGGTGGTTTGGCATTCGCAGAGACTTCTGTCAG
TTTCTGCTTGAAATTTTCCCATTTTTAAGAGAATATGGGAACATTTCATATGATCTCCATCACGAAGATA
GTGAAGATGCTGAAGAAACATCAGTTCCAGAAGCTCCGAAAATTGCTCCAATATTTGGAAAGAAGGCCAG
AGTAGTTATAACCCAGAGCCCTGGGAAATACGTTCCCCCCCCTCCCAAGTTAAATATTGATATGCCAGAT
TAA

Translation (350 aa):
MNPRGLFQDFNPSKFLIYTCLLLFSVLLPLRLDGIIQWSYWAVFAPIWLWKLLVVAGASVGAGVWARNPR
YRTEGEACVEFKAMLIAVGIHLLLLMFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAACVWGFRHDRSL
ELEILCSVNILQFIFIALKLDRIIHWPWLVVFVPLWILMSFLCLVVLYYIVWSLLFLRSLDVVAEQRRTH
VTMAISWITIVVPLLTFEVLLVHRLDGHNTFSYVSIFVPLWLSLLTLMATTFRRKGGNHWWFGIRRDFCQ
FLLEIFPFLREYGNISYDLHHEDSEDAEETSVPEAPKIAPIFGKKARVVITQSPGKYVPPPPKLNIDMPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH