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Report for CCDS34365.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34365.1 Public Homo sapiens 6 OR2H2 24 110 108 CCDS HistoryNCBI Gene:7932Re-query CCDS DB by CCDS ID:34365.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34365.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383640.4 ENSP00000373136.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000383640.4Link to Ensembl Protein Viewer:ENSP00000373136.2Re-query CCDS DB by Nucleotide ID:ENST00000383640Re-query CCDS DB by Protein ID:ENSP00000373136
Original member Current member EBI ENST00000641840.1 ENSP00000492959.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641840.1Link to Ensembl Protein Viewer:ENSP00000492959.1Re-query CCDS DB by Nucleotide ID:ENST00000641840Re-query CCDS DB by Protein ID:ENSP00000492959
Original member Current member NCBI NM_007160.4 NP_009091.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007160.4Link to Protein Sequence:NP_009091.3Re-query CCDS DB by Nucleotide ID:NM_007160Re-query CCDS DB by Protein ID:NP_009091Link to BLAST:NP_009091.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009091.3 312 O95918 312 100% 0 0

Chromosomal Locations for CCDS 34365.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 29587945 29588883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGTTAACCAAAGCTCCACACCGGGCTTCCTCCTTCTGGGCTTCTCTGAACACCCAGGGCTGGAAAGGA
CTCTCTTCGTGGTTGTCCTCACTTCCTACCTCCTAACCCTAGTGGGCAACACACTCATCATCCTGCTGTC
TGCGCTGGACCCCAAGCTCCACTCTCCAATGTACTTTTTCCTCTCCAACCTCTCCTTCTTGGACCTCTGT
TTCACCACGAGTTGTGTTCCCCAAATGCTGGTCAACCTCTGGGGCCCAAAGAAGACCATCAGCTTCCTGG
ACTGCTCTGTCCAGATCTTCATCTTCCTGTCCCTGGGGACAACTGAGTGCATCCTCTTGACAGTGATGGC
TTTTGATCGCTACGTGGCTGTCTGCCAGCCCCTCCACTATGCCACCATCATCCACCCCCGCCTGTGCTGG
CAGCTGGCATCTGTGGCCTGGGTCATTGGGCTAGTGGAGTCAGTGGTCCAGACACCATCCACCCTGCACC
TGCCCTTCTGCCCCGATCGGCAGGTGGATGATTTTGTCTGTGAGGTCCCAGCTCTAATTCGACTCTCCTG
TGAAGACACCTCCTACAATGAGATCCAGGTGGCTGTTGCCAGTGTCTTCATCTTGGTTGTGCCTCTCAGC
CTCATCCTTGTCTCTTACGGAGCCATTACCTGGGCAGTGCTGAGGATTAACTCTGCAAAAGGGCGGAGGA
AAGCTTTTGGGACCTGCTCCTCCCATCTCACTGTGGTCACCCTCTTCTACAGCTCAGTCATTGCTGTCTA
CCTCCAGCCCAAAAATCCCTATGCCCAAGAGAGGGGCAAGTTCTTTGGTCTCTTCTATGCAGTGGGCACT
CCTTCACTTAACCCTCTCATATACACCCTGAGGAACAAGGAGGTAACCAGGGCATTCAGGAGATTGCTGG
GGAAGGAAATGGGGCTCACACAAAGCTGA

Translation (312 aa):
MVNQSSTPGFLLLGFSEHPGLERTLFVVVLTSYLLTLVGNTLIILLSALDPKLHSPMYFFLSNLSFLDLC
FTTSCVPQMLVNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCW
QLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSCEDTSYNEIQVAVASVFILVVPLS
LILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYAQERGKFFGLFYAVGT
PSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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