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Report for CCDS5149.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5149.1 Public Homo sapiens 6 OR2A4 24 110 108 CCDS HistoryNCBI Gene:79541Re-query CCDS DB by CCDS ID:5149.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5149.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315453.4 ENSP00000319546.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000315453.4Link to Ensembl Protein Viewer:ENSP00000319546.2Re-query CCDS DB by Nucleotide ID:ENST00000315453Re-query CCDS DB by Protein ID:ENSP00000319546
Original member Current member NCBI NM_030908.2 NP_112170.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030908.2Link to Protein Sequence:NP_112170.1Re-query CCDS DB by Nucleotide ID:NM_030908Re-query CCDS DB by Protein ID:NP_112170Link to BLAST:NP_112170.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112170.1 310 O95047 310 100% 0 0

Chromosomal Locations for CCDS 5149.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 131700469 131701401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGGAGACAATATAACATCCATCAGAGAGTTCCTCCTACTGGGATTTCCCGTTGGCCCAAGGATTCAGA
TGCTCCTCTTTGGGCTCTTCTCCCTGTTCTACGTCTTCACCCTGCTGGGGAACGGGACCATACTGGGGCT
CATCTCACTGGACTCCAGACTGCACGCCCCCATGTACTTCTTCCTCTCACACCTGGCGGTCGTCGACATC
GCCTACGCCTGCAACACGGTGCCCCGGATGCTGGTGAACCTCCTGCATCCAGCCAAGCCCATCTCCTTTG
CGGGCCGCATGATGCAGACCTTTCTGTTTTCCACTTTTGCTGTCACAGAATGTCTCCTCCTGGTGGTGAT
GTCCTATGATCTGTACGTGGCCATCTGCCACCCCCTCCGATATTTGGCCATCATGACCTGGAGAGTCTGC
ATCACCCTCGCGGTGACTTCCTGGACCACTGGAGTCCTTTTATCCTTGATTCATCTTGTGTTACTTCTAC
CTTTACCCTTCTGTAGGCCCCAGAAAATTTATCACTTTTTTTGTGAAATCTTGGCTGTTCTCAAACTTGC
CTGTGCAGATACCCACATCAATGAGAACATGGTCTTGGCCGGAGCAATTTCTGGGCTGGTGGGACCCTTG
TCCACAATTGTAGTTTCATATATGTGCATCCTCTGTGCTATCCTTCAGATCCAATCAAGGGAAGTTCAGA
GGAAAGCCTTCCGCACCTGCTTCTCCCACCTCTGTGTGATTGGACTCGTTTATGGCACAGCCATTATCAT
GTATGTTGGACCCAGATATGGGAACCCCAAGGAGCAGAAGAAATATCTCCTGCTGTTTCACAGCCTCTTT
AATCCCATGCTCAATCCCCTTATCTGTAGTCTTAGGAACTCAGAAGTGAAGAATACTTTGAAGAGAGTGC
TGGGAGTAGAAAGGGCTTTATGA

Translation (310 aa):
MGDNITSIREFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDI
AYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFSTFAVTECLLLVVMSYDLYVAICHPLRYLAIMTWRVC
ITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKLACADTHINENMVLAGAISGLVGPL
STIVVSYMCILCAILQIQSREVQRKAFRTCFSHLCVIGLVYGTAIIMYVGPRYGNPKEQKKYLLLFHSLF
NPMLNPLICSLRNSEVKNTLKRVLGVERAL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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