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Report for CCDS10270.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10270.1 Public Homo sapiens 15 LMAN1L 24 110 108 CCDS HistoryNCBI Gene:79748Re-query CCDS DB by CCDS ID:10270.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10270.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309664.10 ENSP00000310431.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309664.10Link to Ensembl Protein Viewer:ENSP00000310431.5Re-query CCDS DB by Nucleotide ID:ENST00000309664Re-query CCDS DB by Protein ID:ENSP00000310431
Original member Current member NCBI NM_021819.3 NP_068591.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021819.3Link to Protein Sequence:NP_068591.2Re-query CCDS DB by Nucleotide ID:NM_021819Re-query CCDS DB by Protein ID:NP_068591Link to BLAST:NP_068591.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068591.2 526 Q9HAT1-1 526 100% 0 0

Chromosomal Locations for CCDS 10270.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74812855 74813029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74816157 74816311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74816427 74816534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74816632 74816690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74818718 74818817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74819152 74819272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74820044 74820099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74820635 74820767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74821075 74821226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74821829 74821900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74822642 74822709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74823559 74823682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74824351 74824478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74825476 74825605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGCCGGCGGTCAGTGGTCCAGGTCCCTTATTCTGCCTTCTCCTCCTGCTCCTGGACCCCCACAGCCCTG
AGACGGGGTGTCCTCCTCTACGCAGGTTTGAGTACAAGCTCAGCTTCAAAGGCCCAAGGCTGGCATTGCC
TGGGGCTGGAATACCCTTCTGGAGCCATCATGGAGACGCCATCCTGGGCCTGGAGGAAGTGCGGCTGACG
CCATCCATGAGGAACCGGAGTGGCGCCGTGTGGAGCAGGGCCTCTGTCCCCTTCTCTGCCTGGGAAGTAG
AGGTGCAGATGAGGGTGACGGGACTGGGGCGCCGGGGAGCCCAGGGCATGGCCGTGTGGTACACCCGGGG
CAGGGGCCATGTAGGCTCTGTCCTTGGGGGGCTGGCTTCGTGGGACGGCATCGGGATCTTCTTTGACTCT
CCGGCAGAGGATACTCAGGACAGTCCTGCCATCCGTGTGCTGGCCAGCGACGGGCACATCCCCTCTGAGC
AGCCTGGGGATGGAGCTAGCCAAGGGCTGGGCTCCTGTCATTGGGACTTCCGGAACCGGCCACACCCCTT
CAGAGCACGGATCACCTACTGGGGGCAGAGGCTGCGCATGTCCTTGAACAGTGGCCTCACTCCCAGTGAT
CCAGGTGAGTTCTGTGTGGATGTGGGGCCCCTGCTTTTGGTCCCTGGAGGTTTCTTTGGGGTCTCAGCAG
CCACCGGCACCCTGGCAGATGATCATGATGTCCTGTCCTTCCTGACCTTCAGCCTGAGTGAGCCCAGCCC
AGAGGTTCCCCCTCAGCCCTTCCTGGAGATGCAGCAGCTCCGCCTGGCGAGGCAGCTGGAAGGGCTGTGG
GCAAGGCTGGGCTTGGGCACCAGGGAGGATGTAACTCCAAAATCAGACTCTGAAGCTCAAGGAGAAGGGG
AAAGGCTCTTTGACCTGGAGGAGACGCTGGGCAGACACCGCCGGATCCTGCAGGCTCTGCGGGGTCTCTC
CAAGCAGCTGGCCCAGGCTGAGAGACAATGGAAGAAGCAGCTGGGGCCCCCAGGCCAAGCCAGGCCTGAC
GGAGGCTGGGCCCTGGATGCTTCCTGCCAGATTCCATCCACCCCAGGGAGGGGTGGCCACCTCTCCATGT
CACTCAATAAGGACTCTGCCAAGGTCGGTGCCCTGCTCCATGGACAGTGGACTCTGCTCCAGGCCCTGCA
AGAGATGAGGGATGCAGCTGTCCGCATGGCTGCAGAAGCCCAGGTCTCCTACCTGCCTGTGGGCATTGAG
CATCATTTCTTAGAGCTGGACCACATCCTGGGCCTCCTGCAGGAGGAGCTTCGGGGCCCGGCGAAGGCAG
CAGCCAAGGCCCCCCGCCCACCTGGCCAGCCCCCAAGGGCCTCCTCGTGCCTGCAGCCTGGCATCTTCCT
GTTCTACCTCCTCATTCAGACTGTAGGCTTCTTCGGCTACGTGCACTTCAGGCAGGAGCTGAACAAGAGC
CTTCAGGAGTGTCTGTCCACAGGCAGCCTTCCTCTGGGTCCTGCACCACACACCCCCAGGGCCCTGGGGA
TTCTGAGGAGGCAGCCTCTCCCTGCCAGCATGCCTGCCTGA

Translation (526 aa):
MPAVSGPGPLFCLLLLLLDPHSPETGCPPLRRFEYKLSFKGPRLALPGAGIPFWSHHGDAILGLEEVRLT
PSMRNRSGAVWSRASVPFSAWEVEVQMRVTGLGRRGAQGMAVWYTRGRGHVGSVLGGLASWDGIGIFFDS
PAEDTQDSPAIRVLASDGHIPSEQPGDGASQGLGSCHWDFRNRPHPFRARITYWGQRLRMSLNSGLTPSD
PGEFCVDVGPLLLVPGGFFGVSAATGTLADDHDVLSFLTFSLSEPSPEVPPQPFLEMQQLRLARQLEGLW
ARLGLGTREDVTPKSDSEAQGEGERLFDLEETLGRHRRILQALRGLSKQLAQAERQWKKQLGPPGQARPD
GGWALDASCQIPSTPGRGGHLSMSLNKDSAKVGALLHGQWTLLQALQEMRDAAVRMAAEAQVSYLPVGIE
HHFLELDHILGLLQEELRGPAKAAAKAPRPPGQPPRASSCLQPGIFLFYLLIQTVGFFGYVHFRQELNKS
LQECLSTGSLPLGPAPHTPRALGILRRQPLPASMPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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