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Report for CCDS6091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6091.1 Public Homo sapiens 8 RNF122 24 110 108 CCDS HistoryNCBI Gene:79845Re-query CCDS DB by CCDS ID:6091.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6091.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256257.2 ENSP00000256257.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256257.2Link to Ensembl Protein Viewer:ENSP00000256257.1Re-query CCDS DB by Nucleotide ID:ENST00000256257Re-query CCDS DB by Protein ID:ENSP00000256257
Original member Current member NCBI NM_024787.3 NP_079063.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024787.3Link to Protein Sequence:NP_079063.2Re-query CCDS DB by Nucleotide ID:NM_024787Re-query CCDS DB by Protein ID:NP_079063Link to BLAST:NP_079063.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079063.2 155 Q9H9V4 155 100% 0 0

Chromosomal Locations for CCDS 6091.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 33548753 33548867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33549410 33549492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33551044 33551085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33551344 33551389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33558615 33558771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33566699 33566723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (468 nt):
ATGCACCCATTCCAGTGGTGTAACGGGTGTTTCTGTGGCCTGGGACTGGTTAGCACCAACAAGTCCTGCT
CGATGCCACCCATCAGTTTCCAGGACCTTCCGCTCAACATCTATATGGTCATCTTCGGCACAGGCATCTT
TGTCTTCATGCTCAGCCTTATCTTCTGCTGCTATTTTATCAGCAAACTGCGGAACCAGGCACAGAGTGAG
CGATACGGATATAAGGAGGTGGTGCTTAAAGGTGATGCCAAGAAGTTACAATTATATGGGCAGACCTGCG
CAGTCTGTCTGGAAGACTTCAAGGGGAAGGATGAGTTAGGCGTGCTCCCGTGCCAACACGCCTTTCACCG
CAAGTGTCTGGTGAAATGGCTGGAAGTTCGCTGTGTCTGCCCCATGTGTAACAAGCCCATTGCTAGTCCC
TCAGAGGCCACGCAGAACATTGGGATTCTATTGGATGAGCTGGTGTGA

Translation (155 aa):
MHPFQWCNGCFCGLGLVSTNKSCSMPPISFQDLPLNIYMVIFGTGIFVFMLSLIFCCYFISKLRNQAQSE
RYGYKEVVLKGDAKKLQLYGQTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWLEVRCVCPMCNKPIASP
SEATQNIGILLDELV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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