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Report for CCDS77198.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77198.1 Public Homo sapiens 18 PTGR3 24 110 108 CCDS HistoryNCBI Gene:284273Re-query CCDS DB by CCDS ID:77198.1Re-query CCDS DB by GeneID:284273See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77198.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000537114.2 ENSP00000440111.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537114.2Link to Ensembl Protein Viewer:ENSP00000440111.2Re-query CCDS DB by Nucleotide ID:ENST00000537114Re-query CCDS DB by Protein ID:ENSP00000440111
Original member Current member NCBI NM_001306093.1 NP_001293022.1 Accepted alive Link to Nucleotide Sequence:NM_001306093.1Link to Protein Sequence:NP_001293022.1Re-query CCDS DB by Nucleotide ID:NM_001306093Re-query CCDS DB by Protein ID:NP_001293022Link to BLAST:NP_001293022.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001293022.1 254 Q8N4Q0-2 254 100% 0 0

Chromosomal Locations for CCDS 77198.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 75201416 75202180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGGCACCTGGTTCTTTTGCTGAGTACACAGTTGTGCCTGCCAGCATTGCAACTCCAGTGCCCTCAGTGA
AACCCGAGTATCTTACCCTGCTGGTAAGTGGCACCACCGCATACATCAGCCTGAAAGAGCTCGGAGGACT
GTCGGAAGGGAAAAAAGTTTTGGTGACAGCAGCAGCTGGGGGAACGGGCCAGTTTGCCATGCAGCTTTCA
AAGAAGGCAAAGTGCCATGTAATTGGAACCTGCTCTTCTGATGAAAAGTCTGCTTTTCTGAAATCTCTTG
GCTGTGATCGTCCTATCAACTATAAAACTGAACCCGTAGGTACCGTCCTTAAGCAGGAGTACCCTGAAGG
TGTCGATGTGGTCTATGAATCTGTTGGGGGAGCCATGTTTGACTTGGCTGTAGACGCCCTGGCTACGAAA
GGGCGCTTGATAGTAATAGGGTTTATCTCTGGCTACCAAACTCCTACTGGCCTTTCGCCTGTGAAAGCAG
GAACATTGCCAGCCAAACTGCTCAAGAAATCTGCCAGCGTACAGGGCTTCTTCCTGAACCATTACCTTTC
TAAGTATCAAGCAGCCATGAGCCACTTGCTCGAGATGTGTGTGAGCGGAGACCTGGTTTGTGAGGTGGAC
CTTGGAGATCTGTCTCCAGAGGGCAGGTTTACTGGCCTGGAGTCCATATTCCGTGCTGTCAATTATATGT
ACATGGGAAAAAACACTGGAAAAATTGTAGTTGAATTACCTCACTCTGTCAACAGTAAGCTGTAA

Translation (254 aa):
MAPGSFAEYTVVPASIATPVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLS
KKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATK
GRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVD
LGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPHSVNSKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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