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Report for CCDS77201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77201.1 Public Homo sapiens 18 ZNF236 24 110 108 CCDS HistoryNCBI Gene:7776Re-query CCDS DB by CCDS ID:77201.1Re-query CCDS DB by GeneID:7776See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77201.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320610.14 ENSP00000322361.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000320610.14Link to Ensembl Protein Viewer:ENSP00000322361.9Re-query CCDS DB by Nucleotide ID:ENST00000320610Re-query CCDS DB by Protein ID:ENSP00000322361
Original member Current member NCBI NM_001306089.2 NP_001293018.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001306089.2Link to Protein Sequence:NP_001293018.1Re-query CCDS DB by Nucleotide ID:NM_001306089Re-query CCDS DB by Protein ID:NP_001293018Link to BLAST:NP_001293018.1

Chromosomal Locations for CCDS 77201.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 76822608 76822662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76849526 76849668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76851775 76851939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76868685 76868863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76871701 76871825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76875492 76875664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76878009 76878152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76880113 76880316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76881284 76881512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76895013 76895285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76899019 76899222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76904380 76904521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76905155 76905415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76908320 76908573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76910068 76910169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76910660 76910811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76912244 76912347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76913747 76913898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76915647 76915859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76919776 76920058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76923071 76923174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76925189 76925554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76927037 76927182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76927277 76927517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76927927 76928106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76937156 76937343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76947521 76947652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76955985 76956182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76959687 76959816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76960679 76960855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 76968215 76968339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5544 nt):
ATGCCGCGGGGCCGCCCCCCGAAGCCCAGGGAGAGCAAGGCGCGCGGCGACTCCGATGGAGTTTTAACAT
TGAATGCGGAGAACACTAATTATGCCTATCAAGTTCCAAACTTCCATAAATGTGAAATCTGTCTACTATC
TTTTCCAAAAGAATCCCAGTTTCAACGCCACATGAGGGATCACGAGCGAAATGACAAGCCACATCGATGT
GACCAGTGCCCCCAAACATTTAATGTTGAATTCAACCTGACACTTCATAAATGCACCCACAGCGGGGAAG
ATCCTACCTGCCCTGTGTGTAACAAGAAATTCTCCAGAGTGGCTAGTCTCAAAGCGCATATTATGCTACA
TGAAAAGGAAGAGAATCTCATCTGTTCTGAGTGTGGGGATGAGTTTACTCTGCAGAGTCAGCTGGCCGTG
CACATGGAGGAGCACCGCCAGGAGCTGGCTGGAACCCGGCAGCATGCCTGCAAGGCCTGCAAGAAAGAGT
TCGAGACCTCCTCGGAGCTGAAGGAACACATGAAGACTCATTACAAAATTAGGGTATCAAGTACAAGGTC
TTATAACCGGAATATCGACAGAAGTGGATTCACGTATTCGTGTCCGCACTGTGGAAAGACGTTTCAAAAG
CCAAGCCAGTTAACGCGACACATTAGGATACACACAGGTGAAAGGCCGTTCAAATGTAGTGAATGTGGAA
AGGCTTTTAACCAGAAGGGGGCACTGCAGACCCACATGATCAAGCACACAGGTGAAAAACCCCATGCCTG
TGCCTTCTGTCCTGCCGCCTTCTCTCAGAAAGGGAATCTTCAGTCGCACGTGCAGCGAGTCCACTCAGAG
GTCAAGAATGGTCCTACCTATAACTGTACAGAATGTAGTTGTGTATTTAAAAGTTTAGGCAGCTTAAACA
CGCATATCAGCAAGATGCATATGGGTGGGCCACAGAATTCAACAAGTTCTACAGAGACTGCTCATGTTTT
AACGGCCACACTTTTTCAGACGTTACCTCTTCAACAGACGGAAGCCCAAGCCACGTCGGCCTCAAGCCAG
CCGAGCTCCCAGGCGGTGAGCGACGTCATCCAGCAGCTCCTGGAGCTCTCAGAGCCGGCGCCGGTGGAGT
CGGGGCAGTCCCCGCAGCCTGGGCAGCAGCTGAGCATCACAGTGGGCATCAACCAGGACATTTTACAGCA
AGCCTTAGAAAACAGTGGGCTGTCTTCAATTCCAGCTGCAGCACATCCTAATGACTCCTGCCATGCCAAG
ACCTCTGCACCACACGCTCAAAACCCAGATGTTTCCAGCGTTTCAAATGAGCAGACGGACCCCACAGACG
CAGAGCAAGAAAAAGAACAGGAAAGCCCGGAGAAACTGGATAAAAAAGAAAAAAAAATGATAAAGAAGAA
GTCACCGTTTCTACCTGGCTCCATCCGCGAGGAGAACGGCGTGCGCTGGCATGTGTGTCCCTACTGCGCC
AAGGAGTTCCGCAAGCCCAGCGACCTGGTCCGCCACATCCGCATCCACACCCACGAGAAGCCCTTCAAGT
GCCCGCAGTGCTTCCGCGCCTTCGCCGTGAAGAGCACGCTGACAGCGCACATCAAGACGCACACCGGCAT
CAAGGCGTTCAAGTGCCAGTACTGCATGAAGAGCTTCTCCACCTCTGGCAGCCTCAAGGTGCACATTCGC
CTGCACACAGGAGTTAGACCTTTTGCTTGTCCTCACTGTGACAAAAAATTTCGAACCTCAGGCCATAGGA
AGACTCACATTGCTTCCCACTTTAAACATACGGAATTAAGGAAAATGAGGCACCAGCGTAAACCTGCAAA
GGTCCGTGTTGGCAAGACGAATATTCCAGTCCCTGATATTCCTTTGCAGGAACCAATCCTCATAACTGAC
TTAGGTCTCATCCAGCCCATTCCAAAAAACCAGTTTTTCCAAAGCTATTTCAATAATAATTTTGTCAATG
AAGCAGATAGACCATACAAGTGTTTTTACTGTCATCGTGCATATAAAAAATCTTGCCACCTTAAACAACA
CATCAGATCCCATACAGGTGAAAAACCTTTTAAATGTTCTCAGTGTGGAAGAGGCTTTGTTTCTGCAGGC
GTGCTCAAAGCACACATCAGAACACACACAGGACTGAAATCTTTCAAGTGTCTGATATGTAATGGGGCTT
TCACTACTGGTGGCAGCTTACGGCGACACATGGGTATCCACAACGACCTTCGTCCCTATATGTGTCCCTA
TTGCCAAAAAACATTTAAGACTTCACTAAATTGCAAAAAGCACATGAAAACCCACAGATATGAGCTTGCC
CAGCAGCTCCAACAGCATCAGCAGGCAGCCTCGATAGATGACAGCACTGTAGACCAGCAGAGCATGCAGG
CCTCCACTCAAATGCAGGTGGAGATCGAGAGCGACGAGCTGCCGCAGACGGCAGAGGTGGTCGCAGCGAA
CCCCGAGGCCATGCTGGACCTGGAGCCTCAGCATGTGGTGGGCACGGAGGAAGCAGGGCTGGGCCAGCAG
TTGGCAGATCAGCCCCTGGAAGCAGATGAAGATGGGTTTGTGGCTCCACAGGACCCTCTGCGAGGGCACG
TAGACCAGTTTGAAGAGCAGAGCCCTGCGCAACAGTCCTTCGAACCAGCAGGGCTACCCCAAGGTTTTAC
AGTGACTGATACGTACCATCAGCAGCCTCAGTTTCCACCTGTCCAACAGCTACAGGATTCCAGCACACTT
GAGTCTCAGGCCCTCTCCACAAGCTTCCACCAGCAGAGCTTGCTGCAGGCTCCCAGCTCTGATGGGATGA
ATGTAACAACTCGCTTGATTCAGGAGTCATCCCAAGAGGAACTGGACCTGCAGGCACAAGGTTCCCAGTT
TCTGGAGGACAACGAGGACCAGAGCAGGCGCTCTTACAGGTGTGACTATTGCAACAAAGGCTTTAAGAAG
TCCAGCCACCTGAAGCAGCATGTGCGGTCGCACACCGGGGAAAAGCCCTACAAGTGCAAGCTCTGTGGAC
GCGGCTTTGTTTCCTCTGGGGTCCTCAAGTCCCACGAGAAGACACACACAGGAGTGAAGGCGTTCAGCTG
CAGTGTGTGCAATGCTTCCTTCACCACCAATGGCAGCCTCACCCGGCACATGGCCACACATATGAGCATG
AAGCCTTATAAGTGTCCGTTTTGTGAGGAGGGTTTCCGAACTACAGTGCATTGTAAAAAGCACATGAAGA
GACACCAAACAGTCCCCTCTGCTGTGTCAGCCACTGGAGAGACAGAAGGAGGAGACATTTGTATGGAGGA
AGAGGAAGAACATTCTGACAGAAATGCATCACGGAAGTCTCGTCCTGAGGTCATCACTTTCACGGAGGAG
GAGACAGCCCAGTTAGCCAAGATCCGGCCGCAGGAGAGCGCCACGGTGTCAGAGAAGGTCCTGGTGCAGT
CCGCGGCAGAAAAGGACCGCATCAGTGAGCTGAGGGACAAGCAGGCGGAGCTGCAGGACGAGCCCAAGCA
CGCCAACTGCTGCACATACTGCCCCAAGAGCTTCAAGAAACCTAGCGACCTGGTGAGGCATGTTCGAATC
CATACTGGAGAAAAGCCATACAAATGTGATGAATGTGGAAAGAGTTTTACTGTGAAATCCACTCTCGATT
GTCATGTGAAGACTCACACAGGTCAGAAGCTCTTCAGCTGTCACGTCTGCAGCAACGCCTTCTCCACGAA
GGGAAGTCTGAAGGTCCACATGCGCCTGCACACGGGAGCCAAGCCCTTCAAATGCCCGCATTGCGAGCTG
CGTTTCCGTACCTCGGGTAGAAGAAAGACACACATGCAGTTTCATTATAAACCAGACCCAAAGAAGGCCA
GAAAGCCTATGACTCGAAGCTCATCGGAAGGACTGCAGCCTGTAAACCTCCTCAACTCCTCCTCTACTGA
CCCAAACGTGTTTATCATGAACAACTCTGTTCTAACAGGACAGTTTGATCAGAATCTGCTGCAACCAGGA
CTGGTGGGCCAAGCTATTCTCCCTGCCTCTGTGTCAGCTGGGGGTGACCTGACCGTGTCTCTGACAGATG
GGAGCCTGGCTACCCTAGAAGGCATCCAGTTACAGTTGGCTGCTAACTTGGTTGGACCAAATGTACAGAT
TTCTGGAATCGATGCTGCCAGCATTAATAACATTACGTTGCAGATTGATCCAAGCATTCTGCAGCAGACG
CTACAGCAGGGCAACCTATTGGCTCAGCAGCTCACGGGGGAGCCTGGCCTGGCCCCACAGAACAGCTCTC
TCCAGACATCGGACAGCACGGTCCCTGCCAGTGTTGTCATCCAGCCCATCTCAGGCCTGTCCTTACAGCC
CACAGTGACCTCTGCGAACCTGACCATAGGCCCGCTGTCTGAGCAGGATTCAGTGCTGACCACTAACAGC
AGTGGGACCCAAGACCTCACTCAAGTGATGACTTCGCAAGGTCTAGTGTCCCCCTCCGGCGGTCCCCACG
AGATCACCCTGACCATTAACAACTCCAGCCTGAGCCAGGTCCTGGCACAGGCCGCTGGGCCCACTGCCAC
GTCTTCCTCGGGGTCTCCACAGGAAATTACCCTGACTATCTCCGAACTTAACACTACAAGCGGAAGCCTT
CCTTCAACAACACCGATGTCTCCATCGGCCATCTCGACTCAGAACCTGGTCATGTCCTCGTCGGGCGTGG
GAGGTGACGCTAGTGTCACGCTGACGCTGGCCGATACTCAGGGTATGCTATCTGGAGGCCTGGACACTGT
CACACTCAACATCACCTCTCAGGGTCAGCAGTTCCCAGCGCTCCTCACGGATCCCTCTCTCTCGGGCCAG
GGTGGAGCAGGCTCGCCGCAAGTCATACTAGTGAGCCACACGCCACAGTCAGCGTCTGCTGCTTGTGAAG
AAATAGCCTACCAGGTAGCTGGCGTCTCTGGGAACCTGGCCCCGGGCAACCAGCCAGAGAAGGAGGGCCG
GGCGCACCAGTGCCTGGAGTGTGACCGCGCCTTCTCATCGGCGGCGGTGCTCATGCACCACAGCAAGGAG
GTGCATGGCCGGGAGCGCATCCACGGCTGCCCCGTGTGCAGGAAGGCCTTCAAGCGCGCCACGCACCTCA
AGGAGCACATGCAGACACACCAGGCCGGCCCCTCTTTGAGCTCCCAGAAGCCAAGAGTGTTTAAATGTGA
CACTTGTGAGAAGGCATTTGCCAAACCAAGCCAGCTGGAGCGCCACAGCCGCATACATACAGGGGAGCGG
CCGTTCCATTGCACGCTTTGTGAGAAAGCCTTCAACCAGAAGAGTGCGCTGCAGGTGCACATGAAGAAGC
ACACGGGGGAGCGGCCCTACAAGTGTGCCTACTGCGTCATGGGCTTCACGCAGAAGAGCAACATGAAGCT
GCACATGAAGCGGGCGCACAGCTATGCTGGAGCTCTGCAGGAGTCTGCAGGTCACCCGGAGCAGGACGGG
GAGGAGCTGAGCCGGACCCTCCACCTGGAGGAGGTGGTGCAGGAGGCCGCCGGCGAGTGGCAGGCCCTCA
CCCACGTCTTCTGA

Translation (1847 aa):
MPRGRPPKPRESKARGDSDGVLTLNAENTNYAYQVPNFHKCEICLLSFPKESQFQRHMRDHERNDKPHRC
DQCPQTFNVEFNLTLHKCTHSGEDPTCPVCNKKFSRVASLKAHIMLHEKEENLICSECGDEFTLQSQLAV
HMEEHRQELAGTRQHACKACKKEFETSSELKEHMKTHYKIRVSSTRSYNRNIDRSGFTYSCPHCGKTFQK
PSQLTRHIRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAAFSQKGNLQSHVQRVHSE
VKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSTSSTETAHVLTATLFQTLPLQQTEAQATSASSQ
PSSQAVSDVIQQLLELSEPAPVESGQSPQPGQQLSITVGINQDILQQALENSGLSSIPAAAHPNDSCHAK
TSAPHAQNPDVSSVSNEQTDPTDAEQEKEQESPEKLDKKEKKMIKKKSPFLPGSIREENGVRWHVCPYCA
KEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKSFSTSGSLKVHIR
LHTGVRPFACPHCDKKFRTSGHRKTHIASHFKHTELRKMRHQRKPAKVRVGKTNIPVPDIPLQEPILITD
LGLIQPIPKNQFFQSYFNNNFVNEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAG
VLKAHIRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTHRYELA
QQLQQHQQAASIDDSTVDQQSMQASTQMQVEIESDELPQTAEVVAANPEAMLDLEPQHVVGTEEAGLGQQ
LADQPLEADEDGFVAPQDPLRGHVDQFEEQSPAQQSFEPAGLPQGFTVTDTYHQQPQFPPVQQLQDSSTL
ESQALSTSFHQQSLLQAPSSDGMNVTTRLIQESSQEELDLQAQGSQFLEDNEDQSRRSYRCDYCNKGFKK
SSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTHTGVKAFSCSVCNASFTTNGSLTRHMATHMSM
KPYKCPFCEEGFRTTVHCKKHMKRHQTVPSAVSATGETEGGDICMEEEEEHSDRNASRKSRPEVITFTEE
ETAQLAKIRPQESATVSEKVLVQSAAEKDRISELRDKQAELQDEPKHANCCTYCPKSFKKPSDLVRHVRI
HTGEKPYKCDECGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLHTGAKPFKCPHCEL
RFRTSGRRKTHMQFHYKPDPKKARKPMTRSSSEGLQPVNLLNSSSTDPNVFIMNNSVLTGQFDQNLLQPG
LVGQAILPASVSAGGDLTVSLTDGSLATLEGIQLQLAANLVGPNVQISGIDAASINNITLQIDPSILQQT
LQQGNLLAQQLTGEPGLAPQNSSLQTSDSTVPASVVIQPISGLSLQPTVTSANLTIGPLSEQDSVLTTNS
SGTQDLTQVMTSQGLVSPSGGPHEITLTINNSSLSQVLAQAAGPTATSSSGSPQEITLTISELNTTSGSL
PSTTPMSPSAISTQNLVMSSSGVGGDASVTLTLADTQGMLSGGLDTVTLNITSQGQQFPALLTDPSLSGQ
GGAGSPQVILVSHTPQSASAACEEIAYQVAGVSGNLAPGNQPEKEGRAHQCLECDRAFSSAAVLMHHSKE
VHGRERIHGCPVCRKAFKRATHLKEHMQTHQAGPSLSSQKPRVFKCDTCEKAFAKPSQLERHSRIHTGER
PFHCTLCEKAFNQKSALQVHMKKHTGERPYKCAYCVMGFTQKSNMKLHMKRAHSYAGALQESAGHPEQDG
EELSRTLHLEEVVQEAAGEWQALTHVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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