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Report for CCDS34588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34588.1 Public Homo sapiens 7 TTYH3 24 110 108 CCDS HistoryNCBI Gene:80727Re-query CCDS DB by CCDS ID:34588.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258796.12 ENSP00000258796.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258796.12Link to Ensembl Protein Viewer:ENSP00000258796.7Re-query CCDS DB by Nucleotide ID:ENST00000258796Re-query CCDS DB by Protein ID:ENSP00000258796
Original member Current member NCBI NM_025250.3 NP_079526.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025250.3Link to Protein Sequence:NP_079526.1Re-query CCDS DB by Nucleotide ID:NM_025250Re-query CCDS DB by Protein ID:NP_079526Link to BLAST:NP_079526.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079526.1 523 Q9C0H2-1 523 100% 0 0

Chromosomal Locations for CCDS 34588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 2632156 2632278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2646853 2647022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2647142 2647253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2647418 2647638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2647959 2648054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2649567 2649639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2649913 2649988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2652187 2652242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2652918 2653010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2656092 2656184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2656398 2656534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2658286 2658459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2658940 2659015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 2661668 2661739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1572 nt):
ATGGCCGGGGTCAGCTACGCGGCGCCCTGGTGGGTGAGCCTCCTGCACCGGCTGCCCCACTTCGACCTGA
GCTGGGAGGCCACTAGCAGCCAGTTCCGGCCCGAGGACACCGACTACCAGCAGGCCCTGCTGCTCCTGGG
GGCCGCCGCCCTGGCCTGCCTCGCCCTGGACCTCCTCTTCCTGCTCTTCTACTCCTTCTGGCTGTGCTGC
CGGCGGCGCAAGAGCGAGGAGCACCTGGACGCCGACTGCTGCTGCACGGCCTGGTGTGTCATCATCGCCA
CGCTGGTGTGCAGCGCCGGCATCGCAGTGGGATTCTACGGCAACGGGGAGACCAGTGATGGCATCCATAG
GGCCACCTACTCGCTCCGCCACGCCAACCGCACGGTGGCCGGGGTCCAGGACCGCGTGTGGGACACGGCG
GTGGGGCTGAACCACACGGCGGAGCCCAGCCTGCAGACCCTGGAGCGGCAGCTGGCCGGGCGGCCCGAGC
CCCTGCGAGCCGTACAGAGGCTGCAGGGCCTGCTGGAGACGCTGCTGGGCTACACGGCCGCCATCCCCTT
TTGGAGGAACACGGCGGTGTCGCTGGAGGTGCTGGCGGAGCAGGTGGATCTCTACGACTGGTACAGGTGG
CTGGGCTACCTGGGCCTGCTGCTGCTGGACGTCATCATCTGCCTCCTGGTGCTGGTTGGCCTCATCCGCA
GCTCCAAGGGCATCCTGGTGGGGGTCTGCCTGCTGGGAGTCCTGGCCCTGGTCATCAGCTGGGGCGCGCT
GGGCTTGGAGCTGGCTGTGTCCGTGGGCTCCAGCGACTTCTGTGTGGACCCTGACGCCTACGTGACCAAA
ATGGTGGAGGAGTACTCGGTGCTGAGTGGGGACATCCTGCAGTACTACCTGGCCTGCTCGCCCCGCGCCG
CCAACCCCTTCCAGCAGAAGCTGTCGGGCAGCCACAAGGCACTGGTGGAGATGCAGGATGTCGTGGCTGA
GCTTCTGAGGACCGTCCCCTGGGAGCAGCCGGCCACTAAGGACCCCCTCCTCCGCGTCCAGGAGGTGCTG
AATGGCACGGAGGTGAACCTGCAGCACCTCACCGCCCTGGTGGACTGCCGCAGCCTGCATCTGGACTACG
TGCAAGCGCTGACCGGCTTCTGCTATGACGGCGTGGAGGGCCTCATCTACCTGGCCCTCTTCTCCTTCGT
CACAGCCCTCATGTTCAGCTCCATCGTCTGCAGCGTCCCGCACACCTGGCAGCAAAAGAGAGGCCCTGAT
GAGGACGGGGAGGAGGAGGCCGCTCCAGGGCCGCGGCAGGCGCACGACAGCCTCTACCGCGTCCACATGC
CCAGCCTGTACAGCTGTGGCAGCAGCTACGGCAGTGAGACCAGCATCCCGGCCGCGGCCCACACCGTCAG
CAACGCCCCGGTCACTGAGTACATGAGCCAGAACGCTAATTTCCAGAACCCCCGCTGTGAGAACACCCCA
CTCATTGGGCGCGAGTCCCCGCCGCCCTCATACACCTCCAGCATGAGAGCCAAATACCTCGCCACGAGCC
AGCCTCGCCCTGACTCCAGCGGCAGCCACTAG

Translation (523 aa):
MAGVSYAAPWWVSLLHRLPHFDLSWEATSSQFRPEDTDYQQALLLLGAAALACLALDLLFLLFYSFWLCC
RRRKSEEHLDADCCCTAWCVIIATLVCSAGIAVGFYGNGETSDGIHRATYSLRHANRTVAGVQDRVWDTA
VGLNHTAEPSLQTLERQLAGRPEPLRAVQRLQGLLETLLGYTAAIPFWRNTAVSLEVLAEQVDLYDWYRW
LGYLGLLLLDVIICLLVLVGLIRSSKGILVGVCLLGVLALVISWGALGLELAVSVGSSDFCVDPDAYVTK
MVEEYSVLSGDILQYYLACSPRAANPFQQKLSGSHKALVEMQDVVAELLRTVPWEQPATKDPLLRVQEVL
NGTEVNLQHLTALVDCRSLHLDYVQALTGFCYDGVEGLIYLALFSFVTALMFSSIVCSVPHTWQQKRGPD
EDGEEEAAPGPRQAHDSLYRVHMPSLYSCGSSYGSETSIPAAAHTVSNAPVTEYMSQNANFQNPRCENTP
LIGRESPPPSYTSSMRAKYLATSQPRPDSSGSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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