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Report for CCDS58552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58552.1 Public Homo sapiens 17 AARSD1 24 110 108 CCDS HistoryNCBI Gene:80755Re-query CCDS DB by CCDS ID:58552.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58552.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427569.7 ENSP00000400870.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000427569.7Link to Ensembl Protein Viewer:ENSP00000400870.1Re-query CCDS DB by Nucleotide ID:ENST00000427569Re-query CCDS DB by Protein ID:ENSP00000400870
Original member Current member NCBI NM_001261434.2 NP_001248363.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001261434.2Link to Protein Sequence:NP_001248363.1Re-query CCDS DB by Nucleotide ID:NM_001261434Re-query CCDS DB by Protein ID:NP_001248363Link to BLAST:NP_001248363.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001248363.1 412 Q9BTE6-1 412 100% 0 0

Chromosomal Locations for CCDS 58552.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42950593 42950728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42951800 42951894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42953724 42953778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42954876 42954967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42955158 42955224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42955842 42955972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42956204 42956320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42956404 42956560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42957138 42957195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42961192 42961351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42964106 42964237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42964402 42964440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1239 nt):
ATGGCGTTCTGGTGTCAGCGTGACAGTTATGCCCGAGAGTTCACCACCACCGTGGTCTCCTGCTGTCCCG
CGGAGCTGCAGACTGAAGGGAGCAACGGCAAGAAAGAAGTGCTGAGCGGTTTCCAAGTGGTGCTGGAAGA
CACAGTGCTTTTCCCTGAGGGCGGGGGACAGCCTGATGACCGTGGTACAATCAATGACATCTCTGTGCTG
AGAGTGACTCGCCGTGGGGAACAGGCTGATCATTTCACCCAGACACCCCTGGATCCAGGAAGCCAGGTTC
TGGTCCGGGTAGATTGGGAGCGGAGGTTTGACCACATGCAGCAGCATTCAGGGCAGCATCTCATCACGGC
AGTTGCTGACCATCTATTTAAGCTGAAGACAACATCATGGGAGTTAGGGAGATTTCGGAGTGCGATTGAG
CTGGACACCCCCTCTATGACTGCAGAGCAAGTAGCTGCCATTGAGCAGAGCGTCAATGAAAAAATCAGAG
ATCGGCTGCCTGTGAATGTCCGAGAACTGAGCCTGGATGATCCTGAGGTGGAGCAGGTGAGTGGCCGGGG
TTTGCCTGATGATCATGCTGGGCCCATTCGGGTTGTTAACATCGAGGGCGTTGATTCCAACATGTGCTGT
GGGACCCATGTGAGCAATCTCAGTGACCTTCAGGTCATTAAGATTCTGGGCACTGAGAAGGGGAAAAAGA
ACAGAACCAACCTGATATTTCTGTCTGGGAACCGGGTGCTGAAGTGGATGGAGAGAAGTCATGGAACTGA
AAAAGCACTGACTGCTCTGCTTAAGTGTGGAGCAGAGGATCATGTGGAAGCAGTGAAAAAGCTCCAGAAC
TCCACCAAGATCCTGCAGAAGAATAACCTGAATCTGCTCAGAGACCTGGCTGTGCACATTGCCCATAGCC
TCAGGAACAGTCCAGACTGGGGAGGTGTGGTCATATTACACAGGAAGGAGGGTGATTCAGAGTTCATGAA
TATCATTGCCAATGAGATTGGGTCAGAGGAGACCCTCCTGTTCTTAACTGTGGGCGATGAGAAAGGTGGT
GGACTCTTCTTACTGGCAGGGCCACCTGCGTCTGTGGAGACCCTGGGGCCCAGGGTGGCTGAGGTCCTGG
AAGGCAAAGGAGCAGGGAAGAAAGGCCGTTTTCAGGGCAAGGCCACCAAGATGAGCCGGCGGATGGAGGC
GCAGGCGCTTCTCCAGGACTACATCAGCACGCAGAGTGCTAAGGAGTGA

Translation (412 aa):
MAFWCQRDSYAREFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDISVL
RVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELGRFRSAIE
LDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRGLPDDHAGPIRVVNIEGVDSNMCC
GTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVLKWMERSHGTEKALTALLKCGAEDHVEAVKKLQN
STKILQKNNLNLLRDLAVHIAHSLRNSPDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGG
GLFLLAGPPASVETLGPRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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