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Report for CCDS76675.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76675.1 Public Homo sapiens 14 KLHL28 24 110 108 CCDS HistoryNCBI Gene:54813Re-query CCDS DB by CCDS ID:76675.1Re-query CCDS DB by GeneID:54813See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76675.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355081.3 ENSP00000347193.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000355081.3Link to Ensembl Protein Viewer:ENSP00000347193.2Re-query CCDS DB by Nucleotide ID:ENST00000355081Re-query CCDS DB by Protein ID:ENSP00000347193
Original member Current member NCBI NM_001308112.2 NP_001295041.1 Accepted alive Link to Nucleotide Sequence:NM_001308112.2Link to Protein Sequence:NP_001295041.1Re-query CCDS DB by Nucleotide ID:NM_001308112Re-query CCDS DB by Protein ID:NP_001295041Link to BLAST:NP_001295041.1

Chromosomal Locations for CCDS 76675.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 44929028 44929191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44931333 44931541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44934115 44934558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44945030 44945928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 44960887 44960928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1758 nt):
ATGCACTTCAAATGCAAGTATTCCTACCCTGCTCTGTACCAGATGGACCACACATCCCCGACCTACATGC
TT
GCTAACTTAACCCACTTGCATTCTGAACAACTTCTGCAGGGCTTGAATCTTCTTCGCCAACATCACGA
A
CTCTGTGACATCATTCTTCGAGTAGGTGATGTTAAAATTCATGCTCACAAAGTGGTACTTGCCAGCGTC
AGC
CCGTATTTCAAAGCTATGTTCACTGGAAACCTTTCTGAAAAAGAGAACAGTGAGGTTGAGTTTCAAT
GC
ATTGATGAAACTGCTCTCCAGGCCATTGTGGAGTATGCCTATACAGGGACTGTTTTTATTTCTCAGGA
C
ACAGTTGAATCTCTCCTGCCAGCAGCAAACCTACTCCAGATAAAACTTGTCCTGAAAGAATGTTGTGCA
TTT
CTTGAAAGCCAACTTGATCCTGGTAATTGTATTGGAATTTCTCGTTTTGCAGAAACATATGGTTGCC
GT
GACCTTTATTTGGCAGCCACTAAATACATATGCCAGAATTTTGAAGCTGTTTGCCAGACTGAAGAGTT
T
TTTGAGCTTACACATGCTGACTTGGATGAAATTGTTTCCAATGACTGTTTGAATGTAGCTACCGAAGAG
ACT
GTTTTTTATGCATTAGAGTCTTGGATCAAGTATGATGTACAAGAACGCCAGAAATACTTAGCACAGT
TA
CTAAACAGTGTACGATTACCATTGTTGAGTGTTAAGTTTCTCACTAGACTATATGAAGCAAATCATCT
T
ATTCGTGATGATCGCACTTGTAAACATCTTTTGAATGAAGCCCTAAAGTACCACTTTATGCCTGAACAT
AGA
CTCTCTCATCAGACAGTCTTGATGACACGACCTCGCTGTGCTCCCAAAGTACTTTGTGCAGTAGGAG
GG
AAATCTGGACTCTTTGCCTGTTTGGATAGTGTGGAGATGTACTTTCCTCAGAATGACTCTTGGATTGG
T
TTGGCACCCCTAAACATTCCTCGCTATGAATTTGGAATATGCGTTTTAGACCAAAAAGTATATGTTATA
GGT
GGTATTGCAACTAATGTGCGTCCTGGCGTCACTATCAGAAAACATGAAAATTCAGTGGAATGCTGGA
AT
CCTGATACAAATACTTGGACTTCTCTAGAGAGAATGAATGAAAGCCGAAGTACTCTTGGAGTAGTAGT
A
CTTGCAGGAGAACTTTATGCCTTAGGTGGTTATGATGGACAATCTTATTTACAATCTGTAGAGAAGTAC
ATT
CCCAAAATAAGAAAATGGCAACCTGTGGCACCAATGACGACAACAAGAAGTTGTTTTGCTGCAGCGG
TA
TTGGATGGAATGATATATGCCATTGGTGGGTATGGTCCTGCCCACATGAACAGTGTGGAGCGTTATGA
T
CCAAGTAAGGACTCCTGGGAGATGGTTGCATCCATGGCAGATAAAAGGATTCACTTTGGCGTGGGTGTC
ATG
CTAGGCTTTATTTTTGTGGTGGGTGGACATAATGGAGTCTCACATTTGTCCAGCATTGAAAGATACG
AT
CCTCATCAAAATCAGTGGACTGTGTGTAGACCAATGAAAGAACCTAGAACAGGAGTTGGTGCTGCTGT
A
ATCGATAACTACCTTTATGTCGTCGGTGGTCACTCAGGGTCTTCCTATCTGAATACAGTGCAGAAATAT
GAT
CCTATCTCAGATACGTGGCTGGATTCAGCTGGCATGATATACTGTCGCTGCAACTTTGGGTTAACTG
CA
CTTTGA


Translation (585 aa):
MHFKCKYSYPALYQMDHTSPTYMLANLTHLHSEQLLQGLNLLRQHHELCDIILRVGDVKIHAHKVVLASV
S
PYFKAMFTGNLSEKENSEVEFQCIDETALQAIVEYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCA
F
LESQLDPGNCIGISRFAETYGCRDLYLAATKYICQNFEAVCQTEEFFELTHADLDEIVSNDCLNVATEE
T
VFYALESWIKYDVQERQKYLAQLLNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEH
R
LSHQTVLMTRPRCAPKVLCAVGGKSGLFACLD
SVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVI
G
GIATNVRPGVTIRKHENSVECWNPDTNTWTSLERMNESRSTLGVVVLAGELYALGGYDGQSYLQSVEKY
I
PKIRKWQPVAPMTTTRSCFAAAVLDGMIYAIGGYGPAHMN
SVERYDPSKDSWEMVASMADKRIHFGVGV
M
LGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRT
GVGAAVIDNYLYVVGGHSGSSYLNTVQKY
D
PISDTWLDSAGMIYCRCNFGLTAL




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser