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Report for CCDS5981.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5981.1 |
Public |
Homo sapiens |
8 |
FAM167A |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:83648](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:5981.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 8 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 5981.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000284486.9 |
ENSP00000284486.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000284486.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000284486.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000284486](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000284486](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000534308.1 |
ENSP00000432232.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000534308.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000432232.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000534308](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000432232](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000528897.1 |
ENSP00000436655.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000528897.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000436655.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000528897](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000436655](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_053279.3 |
NP_444509.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_053279.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_444509.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_053279](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_444509](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_444509.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_444509.2 |
214 |
Q96KS9 |
214 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 5981.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (645 nt): ATGTCTGTGCCCCAGATCCACGTGGAAGAAGTGGGTGCAGAAGAGGGGGCGGGAGCAGCCGCACCACCCG ATGACCACCTCCGGAGCCTGAAGGCCCTCACCGAGAAACTGAGGCTGGAGACCCGCAGGCCCTCCTACCT GGAATGGCAGGCCAGGCTGGAGGAGCATACCTGGCCCTTCCCGAGGCCGGCTGCGGAGCCACAGGCGAGC TTGGAGGAGGGGGAGCGTGGGGGGCAGGAGCCCTTGCTCCCCCTGAGAGAGGCTGGGCAGCACCCCCCTT CTGCCAGGAGTGCCAGCCAAGGTGCCAGACCCCTGTCCACTGGCAAGCTGGAAGGCTTTCAGAGCATCGA TGAAGCTATAGCCTGGCTCAGGAAGGAACTGACGGAGATGCGGCTGCAGGACCAGCAACTGGCCAGACAG CTCATGCGCCTGCGTGGCGACATCAACAAGCTGAAAATCGAACACACCTGCCGCCTCCACAGGAGGATGC TCAACGATGCCACCTACGAGCTGGAGGAGCGGGATGAGCTGGCCGACCTCTTCTGTGACTCCCCTCTTGC CTCCTCCTTCAGCCTCTCCACACCACTCAAGCTTATTGGCGTGACCAAGATGAACATCAACTCTCGGAGG TTCTCTCTCTGCTGA
Translation (214 aa): MSVPQIHVEEVGAEEGAGAAAPPDDHLRSLKALTEKLRLETRRPSYLEWQARLEEHTWPFPRPAAEPQAS LEEGERGGQEPLLPLREAGQHPPSARSASQGARPLSTGKLEGFQSIDEAIAWLRKELTEMRLQDQQLARQ LMRLRGDINKLKIEHTCRLHRRMLNDATYELEERDELADLFCDSPLASSFSLSTPLKLIGVTKMNINSRR FSLC
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