NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
801.1 Public Homo sapiens 1 GPR61 24 110 108 CCDS HistoryNCBI Gene:83873Re-query CCDS DB by CCDS ID:801.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
Nonsense-mediated decay (NMD) candidate

Sequence IDs included in CCDS 801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000404129.6 ENSP00000385422.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000404129.6Link to Ensembl Protein Viewer:ENSP00000385422.2Re-query CCDS DB by Nucleotide ID:ENST00000404129Re-query CCDS DB by Protein ID:ENSP00000385422
Original member Current member EBI ENST00000527748.5 ENSP00000432456.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000527748.5Link to Ensembl Protein Viewer:ENSP00000432456.1Re-query CCDS DB by Nucleotide ID:ENST00000527748Re-query CCDS DB by Protein ID:ENSP00000432456
Original member Current member EBI ENST00000469383.2 ENSP00000433661.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000469383.2Link to Ensembl Protein Viewer:ENSP00000433661.1Re-query CCDS DB by Nucleotide ID:ENST00000469383Re-query CCDS DB by Protein ID:ENSP00000433661
Original member Current member EBI ENST00000616874.2 ENSP00000484035.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616874.2Link to Ensembl Protein Viewer:ENSP00000484035.1Re-query CCDS DB by Nucleotide ID:ENST00000616874Re-query CCDS DB by Protein ID:ENSP00000484035
Original member Current member EBI ENST00000618721.5 ENSP00000484797.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618721.5Link to Ensembl Protein Viewer:ENSP00000484797.1Re-query CCDS DB by Nucleotide ID:ENST00000618721Re-query CCDS DB by Protein ID:ENSP00000484797
Original member Current member NCBI NM_001393907.1 NP_001380836.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001393907.1Link to Protein Sequence:NP_001380836.1Re-query CCDS DB by Nucleotide ID:NM_001393907Re-query CCDS DB by Protein ID:NP_001380836Link to BLAST:NP_001380836.1
Original member Current member NCBI NM_031936.6 NP_114142.3 Accepted alive Link to Nucleotide Sequence:NM_031936.6Link to Protein Sequence:NP_114142.3Re-query CCDS DB by Nucleotide ID:NM_031936Re-query CCDS DB by Protein ID:NP_114142Link to BLAST:NP_114142.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001380836.1 451 Q9BZJ8 451 100% 0 0
NP_114142.3 451 Q9BZJ8 451 100% 0 0

Chromosomal Locations for CCDS 801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109543023 109544378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1356 nt):
ATGGAGTCCTCACCCATCCCCCAGTCATCAGGGAACTCTTCCACTTTGGGGAGGGTCCCTCAAACCCCAG
GTCCCTCTACTGCCAGTGGGGTCCCGGAGGTGGGGCTACGGGATGTTGCTTCGGAATCTGTGGCCCTCTT
CTTCATGCTCCTGCTGGACTTGACTGCTGTGGCTGGCAATGCCGCTGTGATGGCCGTGATCGCCAAGACG
CCTGCCCTCCGAAAATTTGTCTTCGTCTTCCACCTCTGCCTGGTGGACCTGCTGGCTGCCCTGACCCTCA
TGCCCCTGGCCATGCTCTCCAGCTCTGCCCTCTTTGACCACGCCCTCTTTGGGGAGGTGGCCTGCCGCCT
CTACTTGTTTCTGAGCGTGTGCTTTGTCAGCCTGGCCATCCTCTCGGTGTCAGCCATCAATGTGGAGCGC
TACTATTACGTAGTCCACCCCATGCGCTACGAGGTGCGCATGACGCTGGGGCTGGTGGCCTCTGTGCTGG
TGGGTGTGTGGGTGAAGGCCTTGGCCATGGCTTCTGTGCCAGTGTTGGGAAGGGTCTCCTGGGAGGAAGG
AGCTCCCAGTGTCCCCCCAGGCTGTTCACTCCAGTGGAGCCACAGTGCCTACTGCCAGCTTTTTGTGGTG
GTCTTTGCTGTCCTTTACTTTCTGTTGCCCCTGCTCCTCATACTTGTGGTCTACTGCAGCATGTTCCGAG
TGGCCCGCGTGGCTGCCATGCAGCACGGGCCGCTGCCCACGTGGATGGAGACACCCCGGCAACGCTCCGA
ATCTCTCAGCAGCCGCTCCACGATGGTCACCAGCTCGGGGGCCCCCCAGACCACCCCACACCGGACGTTT
GGGGGAGGGAAAGCAGCAGTGGTTCTCCTGGCTGTGGGGGGACAGTTCCTGCTCTGTTGGTTGCCCTACT
TCTCTTTCCACCTCTATGTTGCCCTGAGTGCTCAGCCCATTTCAACTGGGCAGGTGGAGAGTGTGGTCAC
CTGGATTGGCTACTTTTGCTTCACTTCCAACCCTTTCTTCTATGGATGTCTCAACCGGCAGATCCGGGGG
GAGCTCAGCAAGCAGTTTGTCTGCTTCTTCAAGCCAGCTCCAGAGGAGGAGCTGAGGCTGCCTAGCCGGG
AGGGCTCCATTGAGGAGAACTTCCTGCAGTTCCTTCAGGGGACTGGCTGTCCTTCTGAGTCCTGGGTTTC
CCGACCCCTACCCAGCCCCAAGCAGGAGCCACCTGCTGTTGACTTTCGAATCCCAGGCCAGATAGCTGAG
GAGACCTCTGAGTTCCTGGAGCAGCAACTCACCAGCGACATCATCATGTCAGACAGCTACCTCCGTCCTG
CCGCCTCACCCCGGCTGGAGTCATGA

Translation (451 aa):
MESSPIPQSSGNSSTLGRVPQTPGPSTASGVPEVGLRDVASESVALFFMLLLDLTAVAGNAAVMAVIAKT
PALRKFVFVFHLCLVDLLAALTLMPLAMLSSSALFDHALFGEVACRLYLFLSVCFVSLAILSVSAINVER
YYYVVHPMRYEVRMTLGLVASVLVGVWVKALAMASVPVLGRVSWEEGAPSVPPGCSLQWSHSAYCQLFVV
VFAVLYFLLPLLLILVVYCSMFRVARVAAMQHGPLPTWMETPRQRSESLSSRSTMVTSSGAPQTTPHRTF
GGGKAAVVLLAVGGQFLLCWLPYFSFHLYVALSAQPISTGQVESVVTWIGYFCFTSNPFFYGCLNRQIRG
ELSKQFVCFFKPAPEEELRLPSREGSIEENFLQFLQGTGCPSESWVSRPLPSPKQEPPAVDFRIPGQIAE
ETSEFLEQQLTSDIIMSDSYLRPAASPRLES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH