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Report for CCDS6320.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6320.1 Public Homo sapiens 8 UTP23 24 110 108 CCDS HistoryNCBI Gene:84294Re-query CCDS DB by CCDS ID:6320.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6320.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309822.7 ENSP00000308332.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309822.7Link to Ensembl Protein Viewer:ENSP00000308332.2Re-query CCDS DB by Nucleotide ID:ENST00000309822Re-query CCDS DB by Protein ID:ENSP00000308332
Original member Current member NCBI NM_032334.3 NP_115710.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032334.3Link to Protein Sequence:NP_115710.2Re-query CCDS DB by Nucleotide ID:NM_032334Re-query CCDS DB by Protein ID:NP_115710Link to BLAST:NP_115710.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115710.2 249 Q9BRU9-1 249 100% 0 0

Chromosomal Locations for CCDS 6320.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 116766604 116766791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 116770192 116770366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 116771456 116771842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGAAGATCACAAGGCAGAAACATGCCAAGAAGCATCTTGGCTTCTTCCGCAACAACTTCGGAGTCCGCG
AGCCGTACCAGATCCTGCTGGACGGCACCTTCTGTCAGGCGGCGCTGCGGGGCCGCATCCAGCTGCGGGA
GCAGCTGCCCCGCTACCTCATGGGGGAGACGCAGCTGTGCACCACAAGATGTGTGTTAAAAGAGCTAGAA
ACATTGGGAAAGGACTTATATGGGGCAAAACTGATTGCACAAAAATGCCAAGTTCGAAATTGTCCTCATT
TCAAGAATGCAGTGAGTGGATCAGAATGTCTGCTTTCCATGGTTGAAGAGGGAAATCCTCATCATTATTT
TGTGGCAACACAGGATCAGAATTTGTCTGTGAAAGTAAAAAAGAAGCCTGGAGTTCCTCTCATGTTTATT
ATTCAGAACACTATGGTTTTGGACAAACCTTCTCCCAAAACAATTGCCTTTGTAAAAGCAGTGGAGTCAG
GTCAGCTTGTCTCAGTGCATGAGAAAGAAAGTATCAAACATCTCAAAGAGGAACAGGGTTTAGTGAAAAA
CACTGAACAGAGTAGAAGAAAAAAGCGCAAGAAAATAAGTGGTCCCAATCCTCTTAGTTGTTTGAAGAAA
AAGAAAAAGGCACCGGACACACAATCATCTGCTTCTGAAAAGAAAAGAAAAAGAAAAAGAATTCGGAACA
GATCTAACCCAAAAGTACTTTCTGAGAAGCAGAATGCAGAAGGAGAATGA

Translation (249 aa):
MKITRQKHAKKHLGFFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELE
TLGKDLYGAKLIAQKCQVRNCPHFKNAVSGSECLLSMVEEGNPHHYFVATQDQNLSVKVKKKPGVPLMFI
IQNTMVLDKPSPKTIAFVKAVESGQLVSVHEKESIKHLKEEQGLVKNTEQSRRKKRKKISGPNPLSCLKK
KKKAPDTQSSASEKKRKRKRIRNRSNPKVLSEKQNAEGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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