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Report for CCDS6089.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6089.1 Public Homo sapiens 8 MAK16 24 110 108 CCDS HistoryNCBI Gene:84549Re-query CCDS DB by CCDS ID:6089.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6089.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360128.11 ENSP00000353246.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360128.11Link to Ensembl Protein Viewer:ENSP00000353246.5Re-query CCDS DB by Nucleotide ID:ENST00000360128Re-query CCDS DB by Protein ID:ENSP00000353246
Original member Current member NCBI NM_032509.4 NP_115898.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032509.4Link to Protein Sequence:NP_115898.2Re-query CCDS DB by Nucleotide ID:NM_032509Re-query CCDS DB by Protein ID:NP_115898Link to BLAST:NP_115898.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115898.2 300 Q9BXY0 300 100% 0 0

Chromosomal Locations for CCDS 6089.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 33485207 33485221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33488378 33488427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33488520 33488629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33488734 33488798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33488988 33489139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33490285 33490339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33495542 33495616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33496625 33496741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33497232 33497297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 33498432 33498629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGCAGTCGGATGATGTTATCTGGGATACACTAGGAAACAAGCAATTTTGTTCCTTCAAAATAAGAACCA
AGACTCAGAGCTTCTGCCGAAATGAATATAGCCTGACTGGACTGTGTAATCGGTCATCCTGTCCCCTGGC
AAATAGTCAGTATGCCACTATTAAAGAAGAGAAAGGACAGTGCTACTTGTATATGAAGGTTATAGAACGA
GCGGCTTTTCCTCGGCGTCTCTGGGAACGGGTCCGGCTTAGTAAAAACTATGAGAAAGCACTGGAGCAAA
TAGATGAAAATCTGATTTACTGGCCCCGTTTCATTCGACACAAATGTAAGCAGAGATTCACCAAGATCAC
CCAATACCTAATTCGAATTAGAAAACTTACACTAAAGCGACAGAGGAAACTTGTTCCTTTGAGTAAGAAG
GTGGAGCGTAGGGAGAAAAGAAGAGAGGAAAAGGCATTAATAGCTGCTCAGCTGGACAATGCCATTGAGA
AGGAATTACTGGAGAGACTGAAACAAGATACGTATGGCGACATCTACAACTTCCCCATTCATGCCTTCGA
CAAAGCCCTGGAACAACAGGAGGCAGAGAGTGACTCTTCAGATACTGAGGAAAAAGATGATGATGATGAT
GATGAGGAAGATGTGGGGAAAAGAGAATTTGTCGAAGATGGTGAGGTAGATGAGAGTGACATAAGTGATT
TTGAGGATATGGATAAACTGGATGCCAGCAGTGATGAAGATCAGGATGGTAAATCCTCCAGTGAGGAGGA
GGAAGAAAAGGCCCTTAGTGCGAAACACAAAGGCAAAATGCCCTTGAGAGGACCACTGCAGAGAAAACGA
GCCTATGTGGAAATAGAATACGAGCAGGAGACAGAGCCCGTGGCCAAAGCCAAAACCACGTGA

Translation (300 aa):
MQSDDVIWDTLGNKQFCSFKIRTKTQSFCRNEYSLTGLCNRSSCPLANSQYATIKEEKGQCYLYMKVIER
AAFPRRLWERVRLSKNYEKALEQIDENLIYWPRFIRHKCKQRFTKITQYLIRIRKLTLKRQRKLVPLSKK
VERREKRREEKALIAAQLDNAIEKELLERLKQDTYGDIYNFPIHAFDKALEQQEAESDSSDTEEKDDDDD
DEEDVGKREFVEDGEVDESDISDFEDMDKLDASSDEDQDGKSSSEEEEEKALSAKHKGKMPLRGPLQRKR
AYVEIEYEQETEPVAKAKTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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