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Report for CCDS27026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27026.1 Public Mus musculus 14 Osgep 23 108 98 CCDS HistoryNCBI Gene:66246Re-query CCDS DB by CCDS ID:27026.1Re-query CCDS DB by GeneID:66246See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27026.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000159292.7 ENSMUSP00000124039.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000159292.7Link to Ensembl Protein Viewer:ENSMUSP00000124039.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000159292Re-query CCDS DB by Protein ID:ENSMUSP00000124039
Original member Current member EBI ENSMUST00000160393.7 ENSMUSP00000125155.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160393.7Link to Ensembl Protein Viewer:ENSMUSP00000125155.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160393Re-query CCDS DB by Protein ID:ENSMUSP00000125155
Original member Current member NCBI NM_133676.2 NP_598437.2 Accepted alive Link to Nucleotide Sequence:NM_133676.2Link to Protein Sequence:NP_598437.2Re-query CCDS DB by Nucleotide ID:NM_133676Re-query CCDS DB by Protein ID:NP_598437Link to BLAST:NP_598437.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598437.2 335 Q8BWU5 335 99.403% 0 2

Chromosomal Locations for CCDS 27026.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 50915859 50915898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50916152 50916250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50916342 50916417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50916614 50916704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50916800 50916865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50917232 50917310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50917454 50917503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50917836 50917931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50919616 50919791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50919930 50920049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 50924664 50924778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1008 nt):
ATGCCCGCGGTGCTGGGGTTCGAAGGCAGCGCCAACAAGATCGGCGTGGGCGTGGTCCGCGACGGCACGG
TGCTGGCGAACCCGCGGCGCACTTACGTCACGGCCCCGGGCACCGGATTCCTTCCAGGTGACACGGCCAG
GCACCATCGAGCTGTTATCCTAGACCTACTGCAGGAGGCGCTAACAGAGGCAGGATTGACCTCCAAGGAC
ATTGATTGTATTGCTTTCACCAAAGGTCCTGGCATGGGATCCCCATTGGCTTCTGTAGCTGTTGTTGCCC
GTACAGTGGCCCAGTTGTGGAATAAGCCTTTGCTTGGCGTGAACCACTGCATAGGCCACATTGAAATGGG
CCGTCTCATCACTGGAGCCGTTAACCCAACTGTCCTGTATGTGAGCGGAGGAAATACCCAGGTGATTTCC
TACTCAGAACATCGTTATCGCATCTTTGGAGAAACTATTGATATCGCCGTGGGAAACTGCCTGGATCGTT
TTGCTCGGGTGCTGAAGATTTCCAATGACCCCAGTCCAGGCTACAACATTGAGCAGATGGCAAAGCGAGG
CAAGAAGCTAGTCGAGCTGCCATACACTGTAAAGGGGATGGATGTCTCGTTTTCAGGGATTCTGTCTTTC
ATTGAGGATGCAGCGCAGCGAATGCTGGCCACTGGAGAGTGTACTCCTGAAGACCTGTGTTTCTCCTTAC
AGGAAACCGTGTTTGCAATGCTAGTGGAAATCACGGAGCGAGCCATGGCACACTGTGGCTCCAAGGAAGC
CCTCATCGTCGGAGGAGTTGGATGTAACCTGAGGCTGCAGGAGATGATGGGGACAATGTGCCAGGAGCGG
GGAGCCCAGCTCTTTGCAACAGATGAGAGATTCTGCGTTGACAATGGAGCCATGATAGCCCAAGCTGGTT
GGGAGATGTTTCAGGCTGGGCACAGGACTCCTCTCAAAGATTCTGCAATTACTCAGAGGTATAGGACAGA
TGAAGTGGAAGTGACATGGAGGGACTAA

Translation (335 aa):
MPAVLGFEGSANKIGVGVVRDGTVLANPRRTYVTAPGTGFLPGDTARHHRAVILDLLQEALTEAGLTSKD
IDCIAFTKGPGMGSPLASVAVVARTVAQLWNKPLLGVNHCIGHIEMGRLITGAVNPTVLYVSGGNTQVIS
YSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNIEQMAKRGKKLVELPYTVKGMDVSFSGILSF
IEDAAQRMLATGECTPEDLCFSLQETVFAMLVEITERAMAHCGSKEALIVGGVGCNLRLQEMMGTMCQER
GAQLFATDERFCVDNGAMIAQAGWEMFQAGHRTPLKDSAITQRYRTDEVEVTWRD


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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