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Report for CCDS13958.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13958.1 Public Homo sapiens 22 GALR3 24 110 108 CCDS HistoryNCBI Gene:8484Re-query CCDS DB by CCDS ID:13958.1See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13958.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249041.3 ENSP00000249041.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000249041.3Link to Ensembl Protein Viewer:ENSP00000249041.2Re-query CCDS DB by Nucleotide ID:ENST00000249041Re-query CCDS DB by Protein ID:ENSP00000249041
Original member Current member NCBI NM_003614.2 NP_003605.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003614.2Link to Protein Sequence:NP_003605.1Re-query CCDS DB by Nucleotide ID:NM_003614Re-query CCDS DB by Protein ID:NP_003605Link to BLAST:NP_003605.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003605.1 368 O60755 368 100% 0 0

Chromosomal Locations for CCDS 13958.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 37823407 37823765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 37824723 37825470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGGCTGATGCCCAGAACATTTCACTGGACAGCCCAGGGAGTGTGGGGGCCGTGGCAGTGCCTGTGGTCT
TTGCCCTAATCTTCCTGCTGGGCACAGTGGGCAATGGGCTGGTGCTGGCAGTGCTCCTGCAGCCTGGCCC
GAGTGCCTGGCAGGAGCCTGGCAGCACCACGGACCTGTTCATCCTCAACCTGGCGGTGGCTGACCTCTGC
TTCATCCTGTGCTGCGTGCCCTTCCAGGCCACCATCTACACGCTGGATGCCTGGCTCTTTGGGGCCCTCG
TCTGCAAGGCCGTGCACCTGCTCATCTACCTCACCATGTACGCCAGCAGCTTTACGCTGGCTGCTGTCTC
CGTGGACAGGTACCTGGCCGTGCGGCACCCGCTGCGCTCGCGCGCCCTGCGCACGCCGCGTAACGCCCGC
GCCGCAGTGGGGCTGGTGTGGCTGCTGGCGGCGCTCTTCTCGGCGCCCTACCTCAGCTACTACGGCACCG
TGCGCTACGGCGCGCTGGAGCTCTGCGTGCCCGCCTGGGAGGACGCGCGCCGCCGCGCCCTGGACGTGGC
CACCTTCGCTGCCGGCTACCTGCTGCCCGTGGCTGTGGTGAGCCTGGCCTACGGGCGCACGCTGCGCTTC
CTGTGGGCCGCCGTGGGTCCCGCGGGCGCGGCGGCGGCCGAGGCGCGGCGGAGGGCGACGGGCCGCGCGG
GGCGCGCCATGCTGGCGGTGGCCGCGCTCTACGCGCTCTGCTGGGGTCCGCACCACGCGCTCATCCTGTG
CTTCTGGTACGGCCGCTTCGCCTTCAGCCCGGCCACCTACGCCTGCCGCCTGGCCTCACACTGCCTGGCC
TACGCCAACTCCTGCCTCAACCCGCTCGTCTACGCGCTCGCCTCGCGCCACTTCCGCGCGCGCTTCCGCC
GCCTGTGGCCGTGCGGCCGCCGACGCCGCCACCGTGCCCGCCGCGCCTTGCGTCGCGTCCGCCCCGCGTC
CTCGGGCCCACCCGGCTGCCCCGGAGACGCCCGGCCTAGCGGGAGGCTGCTGGCTGGTGGCGGCCAGGGC
CCGGAGCCCAGGGAGGGACCCGTCCACGGCGGAGAGGCTGCCCGAGGACCGGAATAA

Translation (368 aa):
MADAQNISLDSPGSVGAVAVPVVFALIFLLGTVGNGLVLAVLLQPGPSAWQEPGSTTDLFILNLAVADLC
FILCCVPFQATIYTLDAWLFGALVCKAVHLLIYLTMYASSFTLAAVSVDRYLAVRHPLRSRALRTPRNAR
AAVGLVWLLAALFSAPYLSYYGTVRYGALELCVPAWEDARRRALDVATFAAGYLLPVAVVSLAYGRTLRF
LWAAVGPAGAAAAEARRRATGRAGRAMLAVAALYALCWGPHHALILCFWYGRFAFSPATYACRLASHCLA
YANSCLNPLVYALASRHFRARFRRLWPCGRRRRHRARRALRRVRPASSGPPGCPGDARPSGRLLAGGGQG
PEPREGPVHGGEAARGPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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