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Report for CCDS18621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18621.1 Public Mus musculus 4 Mycbp 23 108 98 CCDS HistoryNCBI Gene:56309Re-query CCDS DB by CCDS ID:18621.1Re-query CCDS DB by GeneID:56309See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18621.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030400.13 ENSMUSP00000030400.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030400.13Link to Ensembl Protein Viewer:ENSMUSP00000030400.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000030400Re-query CCDS DB by Protein ID:ENSMUSP00000030400
Original member Current member NCBI NM_019660.3 NP_062634.2 Accepted alive Link to Nucleotide Sequence:NM_019660.3Link to Protein Sequence:NP_062634.2Re-query CCDS DB by Nucleotide ID:NM_019660Re-query CCDS DB by Protein ID:NP_062634Link to BLAST:NP_062634.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062634.2 103 Q9EQS3 103 100% 0 0

Chromosomal Locations for CCDS 18621.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 123905073 123905087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123905234 123905306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123909634 123909682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123909837 123909966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123911093 123911137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGCCCATTACAAAGCCGCCGACTCGAAGCGCGAGCAGTTCCGGAGGTACTTGGAGAAGTCGGGGGTGC
TGGACACGCTGACGAAAGTGTTGGTAGCCTTATATGAAGAACCAGAGAAGCCCACCAGTGCTCTGGATTT
TTTAAAGCATCACTTAGGAGCTGCTACCCCGGAAAACCCAGAAATAGAGCTGCTTCGCCTAGAATTGGCA
GAAATGAAAGAGAAATATGAAGCTACTGTAGAAGAAAATAAAAAACTGAAAGCAAAGCTTGTTCAGTATG
AACCACCTCAGGAGGAGAAGCGTGCTGAATAG

Translation (103 aa):
MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPTSALDFLKHHLGAATPENPEIELLRLELA
EMKEKYEATVEENKKLKAKLVQYEPPQEEKRAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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