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Report for CCDS34756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34756.1 Public Homo sapiens 7 SLC35B4 24 110 108 CCDS HistoryNCBI Gene:84912Re-query CCDS DB by CCDS ID:34756.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34756.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378509.9 ENSP00000367770.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000378509.9Link to Ensembl Protein Viewer:ENSP00000367770.4Re-query CCDS DB by Nucleotide ID:ENST00000378509Re-query CCDS DB by Protein ID:ENSP00000367770
Original member Current member NCBI NM_032826.5 NP_116215.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032826.5Link to Protein Sequence:NP_116215.1Re-query CCDS DB by Nucleotide ID:NM_032826Re-query CCDS DB by Protein ID:NP_116215Link to BLAST:NP_116215.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116215.1 331 Q969S0-1 331 100% 0 0

Chromosomal Locations for CCDS 34756.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 134294833 134295079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134296391 134296466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134299523 134299598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134300152 134300261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134301761 134301821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134302029 134302110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134304805 134304854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134306672 134306774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134309366 134309479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 134316675 134316751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGCGCCCGGCCTTGGCGGTGGGCCTGGTGTTCGCAGGCTGCTGCAGTAACGTGATCTTCCTAGAGCTCC
TGGCCCGGAAGCATCCAGGATGTGGGAACATTGTGACATTTGCACAATTTTTATTTATTGCTGTGGAAGG
CTTCCTCTTTGAAGCTGATTTGGGAAGGAAGCCACCAGCTATCCCAATAAGGTACTATGCCATAATGGTG
ACCATGTTCTTCACCGTGAGCGTGGTGAACAACTATGCCCTGAATCTCAACATTGCCATGCCCCTGCATA
TGATATTTAGATCCGGTTCTCTAATTGCCAACATGATTCTAGGAATTATCATTTTGAAGAAAAGATACAG
TATATTCAAATATACCTCCATTGCCCTGGTGTCTGTGGGGATATTTATTTGCACTTTTATGTCAGCAAAG
CAGGTGACTTCCCAGTCCAGCTTGAGTGAGAATGATGGATTCCAGGCATTTGTGTGGTGGTTACTAGGTA
TTGGGGCATTGACTTTTGCTCTTCTGATGTCAGCAAGGATGGGGATATTCCAAGAGACTCTCTACAAACG
ATTTGGGAAACACTCCAAGGAGGCTTTGTTTTATAATCACGCCCTTCCACTTCCGGGTTTCGTCTTCTTG
GCTTCTGATATTTATGACCATGCAGTTCTATTCAATAAGTCTGAGTTATATGAAATTCCCGTCATCGGAG
TGACCCTGCCCATCATGTGGTTCTACCTCCTCATGAACATCATCACTCAGTACGTGTGCATCCGGGGTGT
GTTTATCCTCACCACAGAATGCGCCTCCCTCACCGTCACGCTCGTCGTGACCCTACGCAAATTTGTGAGC
CTCATCTTTTCCATCTTGTACTTCCAGAACCCCTTCACCCTGTGGCACTGGCTGGGCACCTTGTTTGTCT
TCATTGGGACCTTAATGTACACAGAGGTGTGGAACAACCTAGGGACCACAAAAAGTGAGCCTCAGAAGGA
CAGCAAGAAGAACTGA

Translation (331 aa):
MRPALAVGLVFAGCCSNVIFLELLARKHPGCGNIVTFAQFLFIAVEGFLFEADLGRKPPAIPIRYYAIMV
TMFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAK
QVTSQSSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHALPLPGFVFL
ASDIYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFILTTECASLTVTLVVTLRKFVS
LIFSILYFQNPFTLWHWLGTLFVFIGTLMYTEVWNNLGTTKSEPQKDSKKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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