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Report for CCDS1445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1445.1 Public Homo sapiens 1 PPP1R15B 24 110 108 CCDS HistoryNCBI Gene:84919Re-query CCDS DB by CCDS ID:1445.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367188.5 ENSP00000356156.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367188.5Link to Ensembl Protein Viewer:ENSP00000356156.4Re-query CCDS DB by Nucleotide ID:ENST00000367188Re-query CCDS DB by Protein ID:ENSP00000356156
Original member Current member NCBI NM_032833.5 NP_116222.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032833.5Link to Protein Sequence:NP_116222.4Re-query CCDS DB by Nucleotide ID:NM_032833Re-query CCDS DB by Protein ID:NP_116222Link to BLAST:NP_116222.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116222.4 713 Q5SWA1 713 100% 0 0

Chromosomal Locations for CCDS 1445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 204406092 204406313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 204409492 204411411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGGAGCCGGGGACAGGCGGATCGCGGAAACGGCTTGGCCCTCGGGCGGGCTTCCGGTTCTGGCCACCCT
TTTTCCCTCGGCGATCGCAAGCAGGCTCTTCTAAGTTCCCGACGCCTCTTGGCCCGGAAAACTCCGGGAA
CCCCACACTGCTTTCCTCTGCCCAGCCCGAGACTCGGGTCAGTTACTGGACGAAACTGCTCTCCCAGCTC
CTTGCGCCGCTCCCCGGATTGCTTCAGAAGGTGCTAATTTGGAGCCAACTTTTCGGTGGAATGTTTCCGA
CCAGATGGCTAGATTTTGCTGGAGTCTACAGCGCCCTGAGAGCCCTGAAGGGACGGGAGAAACCAGCCGC
CCCCACAGCGCAGAAATCTTTGAGTTCGCTGCAGCTCGACTCCTCAGACCCCTCGGTCACCAGTCCCCTT
GATTGGCTAGAGGAGGGGATCCACTGGCAATACTCGCCCCCAGACCTAAAATTGGAGCTTAAGGCCAAGG
GAAGTGCTTTGGACCCTGCAGCACAGGCTTTTCTCTTAGAGCAGCAGCTGTGGGGAGTGGAGCTGTTGCC
CAGTAGCCTTCAATCCCGTCTGTACTCTAACCGGGAACTTGGCTCTTCGCCCTCTGGGCCTCTAAACATT
CAACGCATAGACAATTTCAGTGTGGTATCCTATTTGCTGAACCCTTCCTACCTGGACTGCTTTCCTAGGC
TAGAAGTCAGCTATCAGAACAGTGATGGAAATAGCGAGGTAGTCGGCTTCCAGACACTAACCCCAGAGAG
CAGCTGCCTGAGAGAGGACCATTGTCATCCCCAGCCGCTGAGTGCAGAACTCATTCCGGCCTCGTGGCAG
GGATGTCCACCTCTTTCTACGGAAGGCCTACCAGAAATTCACCATCTTCGCATGAAACGGCTGGAATTCC
TTCAACAGGCTAGCAAGGGGCAAGATTTACCCACCCCTGACCAGGATAATGGCTACCACAGCCTGGAGGA
GGAACACAGCCTTCTCCGGATGGATCCAAAACACTGCAGAGATAACCCAACACAGTTTGTTCCTGCTGCT
GGAGACATTCCTGGAAACACCCAGGAATCCACTGAAGAAAAAATAGAATTATTAACTACAGAGGTTCCAC
TTGCTTTGGAAGAAGAGAGCCCTTCTGAGGGCTGTCCATCTAGTGAGATACCTATGGAAAAGGAGCCTGG
AGAGGGCCGAATAAGTGTAGTTGATTACTCATACCTAGAAGGTGACCTTCCCATTTCTGCCAGACCAGCT
TGTAGTAACAAACTGATAGATTATATTTTGGGAGGTGCATCCAGTGACCTGGAAACAAGTTCTGATCCAG
AAGGTGAGGATTGGGATGAGGAAGCTGAGGATGATGGTTTTGATAGTGATAGCTCACTGTCAGACTCAGA
CCTTGAACAAGACCCTGAAGGGCTTCACCTTTGGAACTCTTTCTGCAGTGTAGATCCTTATAATCCCCAG
AACTTTACAGCAACAATTCAGACTGCTGCCAGAATTGTTCCTGAAGAGCCTTCTGATTCAGAGAAGGATT
TGTCTGGCAAGTCTGATCTAGAGAATTCCTCCCAGTCTGGAAGCCTTCCTGAGACCCCTGAGCATAGTTC
TGGGGAGGAAGATGACTGGGAATCTAGTGCAGATGAAGCAGAGAGTCTCAAACTGTGGAACTCATTCTGT
AATTCTGATGACCCCTACAACCCTTTAAATTTTAAGGCTCCTTTTCAAACATCAGGGGAAAATGAGAAAG
GCTGTCGTGACTCAAAGACCCCATCTGAGTCCATTGTGGCCATTTCTGAGTGTCACACCTTACTTTCTTG
TAAGGTGCAGCTGTTGGGGAGCCAAGAAAGTGAATGTCCAGACTCGGTACAGCGTGACGTTCTTTCTGGA
GGAAGACACACACATGTCAAAAGAAAAAAGGTAACCTTCCTTGAAGAAGTTACTGAGTATTATATAAGTG
GTGATGAGGATCGCAAAGGACCATGGGAAGAATTTGCAAGGGATGGATGCAGGTTCCAGAAACGAATTCA
AGAAACAGAAGATGCTATTGGATATTGCTTGACATTTGAACACAGAGAAAGAATGTTTAATAGACTCCAG
GGAACATGCTTCAAAGGACTTAATGTTCTCAAGCAATGTTGA

Translation (713 aa):
MEPGTGGSRKRLGPRAGFRFWPPFFPRRSQAGSSKFPTPLGPENSGNPTLLSSAQPETRVSYWTKLLSQL
LAPLPGLLQKVLIWSQLFGGMFPTRWLDFAGVYSALRALKGREKPAAPTAQKSLSSLQLDSSDPSVTSPL
DWLEEGIHWQYSPPDLKLELKAKGSALDPAAQAFLLEQQLWGVELLPSSLQSRLYSNRELGSSPSGPLNI
QRIDNFSVVSYLLNPSYLDCFPRLEVSYQNSDGNSEVVGFQTLTPESSCLREDHCHPQPLSAELIPASWQ
GCPPLSTEGLPEIHHLRMKRLEFLQQASKGQDLPTPDQDNGYHSLEEEHSLLRMDPKHCRDNPTQFVPAA
GDIPGNTQESTEEKIELLTTEVPLALEEESPSEGCPSSEIPMEKEPGEGRISVVDYSYLEGDLPISARPA
CSNKLIDYILGGASSDLETSSDPEGEDWDEEAEDDGFDSDSSLSDSDLEQDPEGLHLWNSFCSVDPYNPQ
NFTATIQTAARIVPEEPSDSEKDLSGKSDLENSSQSGSLPETPEHSSGEEDDWESSADEAESLKLWNSFC
NSDDPYNPLNFKAPFQTSGENEKGCRDSKTPSESIVAISECHTLLSCKVQLLGSQESECPDSVQRDVLSG
GRHTHVKRKKVTFLEEVTEYYISGDEDRKGPWEEFARDGCRFQKRIQETEDAIGYCLTFEHRERMFNRLQ
GTCFKGLNVLKQC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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