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Report for CCDS9793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9793.1 Public Homo sapiens 14 EXD2 24 110 108 CCDS HistoryNCBI Gene:55218Re-query CCDS DB by CCDS ID:9793.1Re-query CCDS DB by GeneID:55218See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409949.5 ENSP00000386632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409949.5Link to Ensembl Protein Viewer:ENSP00000386632.1Re-query CCDS DB by Nucleotide ID:ENST00000409949Re-query CCDS DB by Protein ID:ENSP00000386632
Original member Current member EBI ENST00000409675.5 ENSP00000386762.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409675.5Link to Ensembl Protein Viewer:ENSP00000386762.1Re-query CCDS DB by Nucleotide ID:ENST00000409675Re-query CCDS DB by Protein ID:ENSP00000386762
Original member Current member EBI ENST00000409242.5 ENSP00000386839.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409242.5Link to Ensembl Protein Viewer:ENSP00000386839.1Re-query CCDS DB by Nucleotide ID:ENST00000409242Re-query CCDS DB by Protein ID:ENSP00000386839
Original member Current member EBI ENST00000409014.5 ENSP00000386915.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409014.5Link to Ensembl Protein Viewer:ENSP00000386915.1Re-query CCDS DB by Nucleotide ID:ENST00000409014Re-query CCDS DB by Protein ID:ENSP00000386915
Original member Current member NCBI NM_018199.4 NP_060669.1 Accepted alive Link to Nucleotide Sequence:NM_018199.4Link to Protein Sequence:NP_060669.1Re-query CCDS DB by Nucleotide ID:NM_018199Re-query CCDS DB by Protein ID:NP_060669Link to BLAST:NP_060669.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060669.1 496 Q9NVH0-2 496 100% 0 0

Chromosomal Locations for CCDS 9793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 69228858 69229072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69230472 69230598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69234700 69235031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69236046 69236152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69236407 69236542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69237575 69237931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 69240884 69241100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGCCTCCCCAAGTGGCCTGTGTGTCTTGGTTCGCCTGCCCAAGCTAATCTGTGGAGGAAAAACACTAC
CAAGAACGTTATTGGATATTTTGGCAGATGGCACCATTTTGAAAGTTGGAGTGGGATGCTCAGAAGATGC
CAGCAAGCTTCTGCAGGATTATGGCCTCGTTGTTAGGGGGTGCCTGGACCTCCGATACCTAGCCATGCGG
CAGAGAAACAATTTGCTCTGTAATGGGCTTAGCCTGAAGTCCCTCGCTGAGACTGTTTTGAACTTTCCCC
TTGACAAGTCCCTTCTACTTCGTTGCAGCAACTGGGATGCTGAGACTCTCACAGAGGACCAGGTAATTTA
TGCTGCCAGGGATGCCCAGATTTCAGTGGCTCTCTTTCTTCATCTTCTTGGATACCCTTTCTCTAGGAAT
TCACCTGGAGAAAAAAACGATGACCACAGTAGCTGGAGAAAAGTCTTGGAAAAATGCCAGGGTGTGGTCG
ACATCCCATTTCGAAGCAAAGGAATGAGCAGATTGGGAGAAGAGGTTAATGGGGAAGCAACAGAATCTCA
GCAGAAGCCAAGAAATAAGAAGTCTAAGATGGATGGGATGGTGCCAGGCAACCACCAAGGGAGAGACCCC
AGAAAACATAAAAGAAAGCCTCTGGGGGTGGGCTATTCTGCCAGAAAATCACCTCTTTATGATAACTGCT
TTCTCCATGCTCCTGATGGACAGCCCCTCTGCACTTGTGATAGAAGAAAAGCTCAGTGGTACCTGGACAA
AGGCATTGGTGAGCTGGTGAGTGAAGAGCCCTTTGTGGTGAAGCTACGGTTTGAACCTGCAGGAAGGCCC
GAATCTCCTGGAGACTATTACTTGATGGTTAAAGAGAACCTGTGTGTAGTGTGTGGCAAGAGAGACTCCT
ACATTCGGAAGAACGTGATTCCACATGAGTACCGGAAGCACTTCCCCATCGAGATGAAGGACCACAACTC
CCACGATGTGCTGCTGCTCTGCACCTCCTGCCATGCCATTTCCAACTACTATGACAACCATCTGAAGCAG
CAGCTGGCCAAGGAGTTCCAGGCCCCCATCGGCTCTGAGGAGGGCTTGCGCCTGCTGGAAGATCCTGAGC
GCCGGCAGGTGCGTTCTGGGGCCAGGGCCCTGCTCAACGCGGAGAGCCTGCCTACTCAGCGAAAGGAGGA
GCTGCTGCAAGCACTCAGAGAGTTTTATAACACAGACGTGGTCACAGAGGAGATGCTTCAAGAGGCTGCC
AGCCTGGAGACCAGAATCTCCAATGAAAACTATGTTCCTCACGGGCTGAAGGTGGTGCAGTGTCACAGCC
AGGGTGGCCTGCGCTCCCTCATGCAGCTGGAGAGCCGCTGGCGTCAGCACTTCCTGGACTCCATGCAGCC
CAAGCACCTGCCCCAGCAGTGGTCAGTGGACCACAACCATCAGAAGCTGCTCCGGAAATTCGGGGAAGAT
CTTCCCATCCAGCTGTCTTGA

Translation (496 aa):
MASPSGLCVLVRLPKLICGGKTLPRTLLDILADGTILKVGVGCSEDASKLLQDYGLVVRGCLDLRYLAMR
QRNNLLCNGLSLKSLAETVLNFPLDKSLLLRCSNWDAETLTEDQVIYAARDAQISVALFLHLLGYPFSRN
SPGEKNDDHSSWRKVLEKCQGVVDIPFRSKGMSRLGEEVNGEATESQQKPRNKKSKMDGMVPGNHQGRDP
RKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGELVSEEPFVVKLRFEPAGRP
ESPGDYYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYYDNHLKQ
QLAKEFQAPIGSEEGLRLLEDPERRQVRSGARALLNAESLPTQRKEELLQALREFYNTDVVTEEMLQEAA
SLETRISNENYVPHGLKVVQCHSQGGLRSLMQLESRWRQHFLDSMQPKHLPQQWSVDHNHQKLLRKFGED
LPIQLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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