CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS10775.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
10775.1 |
Public |
Homo sapiens |
16 |
RSPRY1 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:89970](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:10775.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 16 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 10775.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000394420.9 |
ENSP00000377942.4 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000394420.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000377942.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000394420](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000377942](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000537866.5 |
ENSP00000443176.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000537866.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000443176.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000537866](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000443176](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001305163.2 |
NP_001292092.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001305163.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001292092.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001305163](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001292092](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001292092.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001305164.2 |
NP_001292093.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001305164.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001292093.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001305164](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001292093](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001292093.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_133368.3 |
NP_588609.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_133368.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_588609.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_133368](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_588609](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_588609.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 10775.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1731 nt): ATGATCGTCTTTGGTTGGGCCGTGTTCTTAGCGAGCAGAAGCCTTGGCCAGGGTCTGTTGTTGACTCTCG AAGAGCACATAGCCCACTTCCTAGGGACTGGAGGTGCCGCTACTACCATGGGTAATTCCTGTATCTGCCG AGATGACAGTGGAACAGATGACAGTGTTGACACCCAACAGCAACAGGCCGAGAACAGTGCAGTACCCACT GCTGACACAAGGAGCCAACCACGGGACCCTGTTCGGCCACCAAGGAGGGGCCGAGGACCTCATGAGCCAA GGAGAAAGAAACAAAATGTGGATGGGCTAGTGTTGGACACACTGGCAGTAATACGGACTCTTGTAGATAA TGATCAGGAACCTCCCTATTCAATGATAACATTACACGAAATGGCAGAAACAGATGAAGGATGGTTGGAT GTTGTCCAGTCTTTAATTAGAGTTATTCCACTGGAAGATCCACTGGGACCAGCTGTTATAACATTGTTAC TAGATGAATGTCCATTGCCCACTAAAGATGCACTCCAGAAATTGACTGAAATTCTCAATTTAAATGGAGA AGTAGCTTGCCAGGACTCAAGCCATCCTGCCAAACACAGGAACACATCTGCAGTCCTAGGCTGCTTGGCC GAGAAACTAGCAGGTCCTGCAAGTATAGGTTTACTTAGCCCAGGAATACTGGAATACTTGCTACAGTGTC TGAAGTTACAGTCCCACCCCACAGTCATGCTTTTTGCACTTATCGCACTGGAAAAGTTTGCACAGACAAG TGAAAATAAATTGACTATTTCTGAATCCAGTATTAGTGACCGGCTTGTCACATTGGAGTCCTGGGCTAAT GATCCTGATTATCTGAAACGTCAAGTTGGTTTCTGTGCCCAGTGGAGCTTAGACAATCTCTTTTTAAAAG AAGGTAGACAGCTGACCTATGAGAAAGTGAACTTGAGTAGCATTAGGGCCATGCTGAATAGCAATGATGT CAGCGAGTACCTGAAGATCTCACCTCATGGCTTAGAGGCTCGCTGTGATGCCTCCTCTTTTGAAAGTGTG CGTTGCACCTTTTGTGTGGATGCCGGGGTATGGTACTATGAAGTAACAGTGGTCACTTCTGGCGTCATGC AGATTGGCTGGGCCACTCGAGACAGCAAATTCCTCAATCATGAAGGCTACGGCATTGGGGATGATGAATA CTCCTGTGCGTATGATGGCTGCCGGCAGCTGATTTGGTACAATGCCAGAAGTAAGCCTCACATACACCCA TGCTGGAAAGAAGGAGATACAGTAGGATTTCTGTTAGACTTGAATGAAAAGCAAATGATCTTCTTTTTAA ATGGCAACCAGCTGCCTCCTGAAAAGCAAGTCTTTTCATCTACTGTATCTGGATTTTTTGCTGCAGCTAG TTTCATGTCATATCAACAATGTGAGTTCAATTTTGGAGCAAAACCATTCAAATACCCACCATCTATGAAA TTTAGCACTTTTAATGACTACGCCTTCCTAACAGCTGAAGAAAAAATCATTTTGCCAAGGCACAGGCGTC TTGCTCTGTTGAAGCAAGTCAGTATCCGAGAAAACTGCTGTTCCCTTTGTTGTGATGAGGTAGCAGACAC ACAATTGAAGCCATGTGGACACAGTGACCTGTGCATGGATTGTGCCTTGCAGCTGGAGACCTGCCCATTG TGTCGTAAAGAAATAGTATCTAGAATCAGACAGATTTCTCATATTTCATGA
Translation (576 aa): MIVFGWAVFLASRSLGQGLLLTLEEHIAHFLGTGGAATTMGNSCICRDDSGTDDSVDTQQQQAENSAVPT ADTRSQPRDPVRPPRRGRGPHEPRRKKQNVDGLVLDTLAVIRTLVDNDQEPPYSMITLHEMAETDEGWLD VVQSLIRVIPLEDPLGPAVITLLLDECPLPTKDALQKLTEILNLNGEVACQDSSHPAKHRNTSAVLGCLA EKLAGPASIGLLSPGILEYLLQCLKLQSHPTVMLFALIALEKFAQTSENKLTISESSISDRLVTLESWAN DPDYLKRQVGFCAQWSLDNLFLKEGRQLTYEKVNLSSIRAMLNSNDVSEYLKISPHGLEARCDASSFESV RCTFCVDAGVWYYEVTVVTSGVMQIGWATRDSKFLNHEGYGIGDDEYSCAYDGCRQLIWYNARSKPHIHP CWKEGDTVGFLLDLNEKQMIFFLNGNQLPPEKQVFSSTVSGFFAAASFMSYQQCEFNFGAKPFKYPPSMK FSTFNDYAFLTAEEKIILPRHRRLALLKQVSIRENCCSLCCDEVADTQLKPCGHSDLCMDCALQLETCPL CRKEIVSRIRQISHIS
|