NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS3581.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3581.1 Public Homo sapiens 4 CCNG2 24 110 108 CCDS HistoryNCBI Gene:901Re-query CCDS DB by CCDS ID:3581.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3581.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316355.10 ENSP00000315743.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316355.10Link to Ensembl Protein Viewer:ENSP00000315743.5Re-query CCDS DB by Nucleotide ID:ENST00000316355Re-query CCDS DB by Protein ID:ENSP00000315743
Original member Current member EBI ENST00000395640.5 ENSP00000379002.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395640.5Link to Ensembl Protein Viewer:ENSP00000379002.1Re-query CCDS DB by Nucleotide ID:ENST00000395640Re-query CCDS DB by Protein ID:ENSP00000379002
Original member Current member EBI ENST00000502280.5 ENSP00000424665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000502280.5Link to Ensembl Protein Viewer:ENSP00000424665.1Re-query CCDS DB by Nucleotide ID:ENST00000502280Re-query CCDS DB by Protein ID:ENSP00000424665
Original member Current member NCBI NM_004354.3 NP_004345.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004354.3Link to Protein Sequence:NP_004345.1Re-query CCDS DB by Nucleotide ID:NM_004354Re-query CCDS DB by Protein ID:NP_004345Link to BLAST:NP_004345.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004345.1 344 Q16589-1 344 100% 0 0

Chromosomal Locations for CCDS 3581.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 77158533 77158670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77159367 77159504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77160721 77160971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77161480 77161558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77161649 77161747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77164274 77164479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 77165801 77165924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGAAGGATTTGGGGGCAGAGCACTTGGCAGGTCATGAAGGGGTCCAACTTCTCGGGTTGTTGAACGTCT
ACCTGGAACAAGAAGAGAGATTCCAACCTCGAGAAAAAGGGCTGAGTTTGATTGAGGCTACCCCGGAGAA
TGATAACACTTTGTGTCCAGGATTGAGAAATGCCAAAGTTGAAGATTTAAGGAGTTTAGCCAACTTTTTT
GGATCTTGCACTGAAACTTTTGTCCTGGCTGTCAATATTTTGGACAGGTTCTTGGCTCTTATGAAGGTGA
AACCTAAACATTTGTCTTGCATTGGAGTCTGTTCTTTTTTGCTGGCTGCTAGAATAGTTGAAGAAGACTG
CAATATTCCATCCACTCATGATGTGATCCGGATTAGTCAGTGTAAATGTACTGCTTCTGACATAAAACGG
ATGGAAAAAATAATTTCAGAAAAATTGCACTATGAATTGGAAGCTACTACTGCCTTAAACTTTTTGCACT
TATACCATACTATTATACTTTGTCATACTTCAGAAAGGAAAGAAATACTGAGCCTTGATAAACTAGAAGC
TCAGCTGAAAGCTTGCAACTGCCGACTCATCTTTTCAAAAGCAAAACCATCTGTATTAGCCTTGTGCCTT
CTCAATTTGGAAGTGGAAACTTTGAAATCTGTTGAATTACTGGAAATTCTCTTGCTAGTTAAAAAACATT
CCAAGATTAATGACACTGAGTTCTTCTACTGGAGAGAGTTGGTTTCTAAATGCCTAGCCGAGTATTCTTC
TCCTGAATGTTGCAAACCAGATCTTAAGAAGTTGGTTTGGATCGTTTCAAGGCGCACAGCCCAGAACCTC
CACAACAGCTACTATAGTGTTCCTGAGCTGCCAACGATACCTGAGGGGGGTTGTTTTGATGAAAGTGAAA
GTGAGGACTCTTGTGAAGATATGAGTTGTGGAGAGGAGAGTCTCAGCAGCTCTCCTCCCAGTGATCAAGA
GTGCACCTTCTTTTTCAACTTCAAAGTGGCACAAACACTGTGCTTTCCATCTTAG

Translation (344 aa):
MKDLGAEHLAGHEGVQLLGLLNVYLEQEERFQPREKGLSLIEATPENDNTLCPGLRNAKVEDLRSLANFF
GSCTETFVLAVNILDRFLALMKVKPKHLSCIGVCSFLLAARIVEEDCNIPSTHDVIRISQCKCTASDIKR
MEKIISEKLHYELEATTALNFLHLYHTIILCHTSERKEILSLDKLEAQLKACNCRLIFSKAKPSVLALCL
LNLEVETLKSVELLEILLLVKKHSKINDTEFFYWRELVSKCLAEYSSPECCKPDLKKLVWIVSRRTAQNL
HNSYYSVPELPTIPEGGCFDESESEDSCEDMSCGEESLSSSPPSDQECTFFFNFKVAQTLCFPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH