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Report for CCDS9110.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9110.1 Public Homo sapiens 12 TMEM263 24 110 108 CCDS HistoryNCBI Gene:90488Re-query CCDS DB by CCDS ID:9110.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9110.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000280756.9 ENSP00000280756.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000280756.9Link to Ensembl Protein Viewer:ENSP00000280756.4Re-query CCDS DB by Nucleotide ID:ENST00000280756Re-query CCDS DB by Protein ID:ENSP00000280756
Original member Current member EBI ENST00000547242.5 ENSP00000446537.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547242.5Link to Ensembl Protein Viewer:ENSP00000446537.1Re-query CCDS DB by Nucleotide ID:ENST00000547242Re-query CCDS DB by Protein ID:ENSP00000446537
Original member Current member EBI ENST00000550344.5 ENSP00000446717.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000550344.5Link to Ensembl Protein Viewer:ENSP00000446717.1Re-query CCDS DB by Nucleotide ID:ENST00000550344Re-query CCDS DB by Protein ID:ENSP00000446717
Original member Current member EBI ENST00000547081.1 ENSP00000449106.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000547081.1Link to Ensembl Protein Viewer:ENSP00000449106.1Re-query CCDS DB by Nucleotide ID:ENST00000547081Re-query CCDS DB by Protein ID:ENSP00000449106
Original member Current member EBI ENST00000548125.5 ENSP00000449785.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548125.5Link to Ensembl Protein Viewer:ENSP00000449785.1Re-query CCDS DB by Nucleotide ID:ENST00000548125Re-query CCDS DB by Protein ID:ENSP00000449785
Original member Current member EBI ENST00000551813.1 ENSP00000450350.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551813.1Link to Ensembl Protein Viewer:ENSP00000450350.1Re-query CCDS DB by Nucleotide ID:ENST00000551813Re-query CCDS DB by Protein ID:ENSP00000450350
Original member Current member NCBI NM_001319661.2 NP_001306590.1 Accepted alive Link to Nucleotide Sequence:NM_001319661.2Link to Protein Sequence:NP_001306590.1Re-query CCDS DB by Nucleotide ID:NM_001319661Re-query CCDS DB by Protein ID:NP_001306590Link to BLAST:NP_001306590.1
Original member Current member NCBI NM_001319662.2 NP_001306591.1 Accepted alive Link to Nucleotide Sequence:NM_001319662.2Link to Protein Sequence:NP_001306591.1Re-query CCDS DB by Nucleotide ID:NM_001319662Re-query CCDS DB by Protein ID:NP_001306591Link to BLAST:NP_001306591.1
Original member Current member NCBI NM_001319663.2 NP_001306592.1 Accepted alive Link to Nucleotide Sequence:NM_001319663.2Link to Protein Sequence:NP_001306592.1Re-query CCDS DB by Nucleotide ID:NM_001319663Re-query CCDS DB by Protein ID:NP_001306592Link to BLAST:NP_001306592.1
Original member Current member NCBI NM_001319664.2 NP_001306593.1 Accepted alive Link to Nucleotide Sequence:NM_001319664.2Link to Protein Sequence:NP_001306593.1Re-query CCDS DB by Nucleotide ID:NM_001319664Re-query CCDS DB by Protein ID:NP_001306593Link to BLAST:NP_001306593.1
Original member Current member NCBI NM_152261.4 NP_689474.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152261.4Link to Protein Sequence:NP_689474.1Re-query CCDS DB by Nucleotide ID:NM_152261Re-query CCDS DB by Protein ID:NP_689474Link to BLAST:NP_689474.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306590.1 116 Q8WUH6 116 100% 0 0
NP_001306591.1 116 Q8WUH6 116 100% 0 0
NP_001306592.1 116 Q8WUH6 116 100% 0 0
NP_001306593.1 116 Q8WUH6 116 100% 0 0
NP_689474.1 116 Q8WUH6 116 100% 0 0

Chromosomal Locations for CCDS 9110.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 106967117 106967180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 106971105 106971391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGAATCAGACAGATAAAAATCAACAAGAAATCCCATCATACCTTAATGATGAACCACCAGAAGGTTCAA
TGAAAGATCACCCACAGCAGCAGCCAGGCATGTTGTCCCGTGTGACTGGGGGTATCTTCAGTGTTACAAA
GGGAGCTGTTGGTGCCACCATTGGTGGTGTGGCTTGGATTGGTGGAAAGAGTCTGGAAGTGACCAAAACA
GCTGTTACAACTGTGCCTTCCATGGGAATAGGGCTGGTGAAAGGGGGTGTCTCTGCTGTGGCTGGAGGTG
TTACAGCTGTTGGGTCTGCTGTTGTAAACAAAGTGCCCTTAACAGGAAAGAAGAAAGACAAATCTGACTG
A

Translation (116 aa):
MNQTDKNQQEIPSYLNDEPPEGSMKDHPQQQPGMLSRVTGGIFSVTKGAVGATIGGVAWIGGKSLEVTKT
AVTTVPSMGIGLVKGGVSAVAGGVTAVGSAVVNKVPLTGKKKDKSD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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