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Report for CCDS33338.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33338.1 Public Homo sapiens 2 SESTD1 24 110 108 CCDS HistoryNCBI Gene:91404Re-query CCDS DB by CCDS ID:33338.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33338.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428443.8 ENSP00000415332.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000428443.8Link to Ensembl Protein Viewer:ENSP00000415332.2Re-query CCDS DB by Nucleotide ID:ENST00000428443Re-query CCDS DB by Protein ID:ENSP00000415332
Original member Current member NCBI NM_178123.5 NP_835224.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178123.5Link to Protein Sequence:NP_835224.3Re-query CCDS DB by Nucleotide ID:NM_178123Re-query CCDS DB by Protein ID:NP_835224Link to BLAST:NP_835224.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_835224.3 696 Q86VW0 696 100% 0 0

Chromosomal Locations for CCDS 33338.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 179109899 179110028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179112724 179112845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179115065 179115256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179116668 179116790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179117532 179117613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179121770 179121929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179123715 179123829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179124364 179124558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179132304 179132426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179143592 179143803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179146402 179146457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179149297 179149394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179151278 179151391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179172120 179172233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179176448 179176538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179183080 179183188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179191787 179191841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2091 nt):
ATGGAGGCCTCAGTAATATTACCCATTCTGAAGAAAAAACTAGCCTTCCTTTCAGGAGGAAAAGACAGAC
GG
AGTGGCCTCATTTTGACAATTCCATTATGCCTCGAACAGACAAATATGGATGAGCTGAGTGTCACCTT
A
GACTACCTACTCAGCATTCCAAGTGAGAAGTGTAAGGCTAGAGGATTTACCGTGATTGTGGATGGCAGA
AAA
TCACAGTGGAATGTGGTGAAAACAGTAGTCGTAATGCTACAGAATGTTGTTCCAGCTGAGGTGTCCC
TT
GTTTGTGTGGTAAAGCCAGATGAATTCTGGGATAAGAAAGTAACGCATTTTTGTTTTTGGAAGGAGAA
G
GATAGACTTGGCTTTGAGGTTATTTTAGTGTCCGCCAACAAATTGACTCGTTATATAGAACCATGCCAA
TTA
ACAGAAGATTTTGGTGGGAGTCTCACCTATGATCACATGGACTGGTTAAATAAGAGGCTGGTTTTTG
AG
AAGTTTACAAAGGAATCTACATCATTATTAGATGAACTTGCTTTGATTAACAATGGAAGTGATAAAGG
A
AATCAGCAAGAGAAAGAAAGGTCTGTGGATTTAAACTTTCTTCCATCGGTTGATCCTGAAACAGTTCTT
CAG
ACAGGGCATGAATTGTTGTCCGAATTACAGCAGCGTCGATTTAATGGCTCAGACGGAGGGGTTTCAT
GG
TCTCCTATGGATGATGAACTTCTTGCACAGCCACAGGTTATGAAATTATTAGATTCACTCCGAGAGCA
A
TATACCCGCTACCAGGAAGTTTGTAGGCAACGTAGCAAGCGCACACAGTTAGAAGAGATTCAACAGAAG
GTA
ATGCAGGTGGTGAACTGGCTAGAAGGGCCTGGATCAGAACAACTAAGAGCCCAGTGGGGCATTGGAG
AC
TCCATTAGGGCCTCCCAGGCCCTACAGCAGAAACACGAAGAGATTGAGAGCCAGCACAGTGAATGGTT
T
GCAGTGTATGTGGAACTTAATCAGCAAATTGCAGCACTCTTGAATGCTGGCGATGAGGAAGATCTTGTG
GAA
CTAAAGTCACTGCAGCAACAACTTAGTGATGTTTGTTATCGACAGGCCAGTCAGCTGGAATTTAGGC
AA
AATCTCTTACAAGCAGCTCTTGAATTTCATGGTGTTGCCCAAGATTTGTCTCAGCAGTTGGATGGCTT
A
TTAGGGATGTTGTGCGTAGATGTAGCACCAGCTGATGGAGCATCGATTCAGCAAACTTTAAAACTGCTT
GAA
GAGAAGCTGAAAAGTGTTGATGTGGGATTGCAAGGTTTGCGTGAAAAAGGTCAAGGTCTCCTGGATC
AG
ATCTCCAATCAGGCATCCTGGGCCTATGGAAAGGATGTAACCATTGAAAATAAAGAAAATGTGGACCA
C
ATACAAGGAGTGATGGAAGATATGCAGCTTAGAAAACAAAGATGTGAAGACATGGTAGATGTGCGAAGG
TTA
AAGATGCTTCAGATGGTGCAGTTGTTTAAATGTGAAGAAGATGCTGCCCAGGCAGTAGAATGGCTAA
GT
GAACTTCTGGATGCTCTGCTTAAGACTCACATCAGATTGGGCGATGATGCTCAAGAAACGAAAGTTTT
G
CTGGAAAAGCATAGAAAATTTGTTGATGTTGCACAGAGCACTTATGACTATGGCAGGCAGTTGCTACAG
GCC
ACAGTTGTGTTATGCCAATCTTTGCGCTGCACTTCTCGGTCATCTGGGGATACACTTCCTCGACTGA
AC
AGAGTATGGAAACAATTTACAATAGCATCTGAAGAGAGAGTACATAGATTGGAAATGGCTATTGCATT
T
CACTCAAATGCTGAAAAGATTTTGCAGGACTGTCCAGAAGAGCCTGAAGCTATTAATGATGAGGAGCAA
TTT
GATGAAATTGAAGCAGTTGGGAAATCACTTTTGGATAGATTAACTGTTCCAGTAGTTTATCCTGATG
G
A
ACCGAACAATATTTTGGGAGTCCAAGTGACATGGCTTCTACTGCAGAAAACATCAGAGACAGGATGAA
A
CTAGTTAATCTCAAAAGGCAGCAGCTGAGACATCCTGAAATGGTGACCACAGAGAGCTAA


Translation (696 aa):
MEASVILPILKKKLAFLSGGKDRRSGLILTIPLCLEQTNMDELSVTLDYLLSIPSEKCKARGFTVIVDGR
K
SQWNVVKTVVVMLQ
NVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQ
L
TEDFGGSLTYDHMDWLNKRL
VFEKFTKESTSLLDELALINNGSDKGNQQEKERSVDLNFLPSVDPETVL
Q
T
GHELLSELQQRRFNGSDGGVSWSPMDDELLAQPQVMKLLDSLREQYTRYQEVCRQRSKRTQLEEIQQK
V
MQ
VVNWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVYVELNQQIAALLNAGDEEDLV
E
LKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQD
LSQQLDGLLGMLCVDVAPADGASIQQTLKLL
E
EKLKSV
DVGLQGLREKGQGLLDQISNQASWAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMVDVRR
L
KMLQMVQLFKCEEDAAQ
AVEWLSELLDALLKTHIRLGDDAQETKVLLEKHRKFVDVAQSTYDYGRQLLQ
A
TVVLCQSLRCTSRSSGDTLPRLNRVWKQFTIASEERVHRLEMAIAFHSNAEK
ILQDCPEEPEAINDEEQ
F
DEIEAVGKSLLDRLTVPVVYPD
GTEQYFGSPSDMASTAENIRDRMKLVNLKRQQLRHPEMVTTES



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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