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Report for CCDS6313.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6313.1 Public Homo sapiens 8 EBAG9 24 110 108 CCDS HistoryNCBI Gene:9166Re-query CCDS DB by CCDS ID:6313.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6313.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337573.10 ENSP00000337675.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000337573.10Link to Ensembl Protein Viewer:ENSP00000337675.5Re-query CCDS DB by Nucleotide ID:ENST00000337573Re-query CCDS DB by Protein ID:ENSP00000337675
Original member Current member EBI ENST00000395785.7 ENSP00000379131.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395785.7Link to Ensembl Protein Viewer:ENSP00000379131.2Re-query CCDS DB by Nucleotide ID:ENST00000395785Re-query CCDS DB by Protein ID:ENSP00000379131
Original member Current member EBI ENST00000620557.4 ENSP00000477645.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620557.4Link to Ensembl Protein Viewer:ENSP00000477645.1Re-query CCDS DB by Nucleotide ID:ENST00000620557Re-query CCDS DB by Protein ID:ENSP00000477645
Original member Current member EBI ENST00000699338.1 ENSP00000514313.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699338.1Link to Ensembl Protein Viewer:ENSP00000514313.1Re-query CCDS DB by Nucleotide ID:ENST00000699338Re-query CCDS DB by Protein ID:ENSP00000514313
Original member Current member NCBI NM_001278938.2 NP_001265867.1 Accepted alive Link to Nucleotide Sequence:NM_001278938.2Link to Protein Sequence:NP_001265867.1Re-query CCDS DB by Nucleotide ID:NM_001278938Re-query CCDS DB by Protein ID:NP_001265867Link to BLAST:NP_001265867.1
Original member Current member NCBI NM_004215.5 NP_004206.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004215.5Link to Protein Sequence:NP_004206.1Re-query CCDS DB by Nucleotide ID:NM_004215Re-query CCDS DB by Protein ID:NP_004206Link to BLAST:NP_004206.1
Original member Current member NCBI NM_198120.3 NP_936056.1 Accepted alive Link to Nucleotide Sequence:NM_198120.3Link to Protein Sequence:NP_936056.1Re-query CCDS DB by Nucleotide ID:NM_198120Re-query CCDS DB by Protein ID:NP_936056Link to BLAST:NP_936056.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265867.1 213 O00559-1 213 100% 0 0
NP_004206.1 213 O00559-1 213 100% 0 0
NP_936056.1 213 O00559-1 213 100% 0 0

Chromosomal Locations for CCDS 6313.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 109550825 109550907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109553865 109553943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109554729 109554887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109556935 109557042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109560838 109560929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 109564439 109564559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGCCATCACCCAGTTTCGGTTATTTAAATTTTGTACCTGCCTAGCAACAGTATTCTCATTCCTAAAGA
GATTAATATGCAGATCTGGCAGAGGACGGAAATTAAGTGGAGACCAAATAACTTTGCCAACTACAGTTGA
TTATTCATCAGTTCCTAAGCAGACAGATGTTGAAGAGTGGACTTCCTGGGATGAAGATGCACCCACCAGT
GTAAAGATCGAAGGAGGGAATGGGAATGTGGCAACACAACAAAATTCTTTGGAACAACTGGAACCTGACT
ATTTTAAGGACATGACACCAACTATTAGGAAAACTCAGAAAATTGTTATTAAGAAGAGAGAACCATTGAA
TTTTGGCATCCCAGATGGGAGCACAGGTTTCTCTAGTAGATTAGCAGCTACACAAGATCTGCCTTTTATT
CATCAGTCTTCTGAATTAGGTGACTTAGATACCTGGCAGGAAAATACCAATGCATGGGAAGAAGAAGAAG
ATGCAGCCTGGCAAGCAGAAGAAGTTCTGAGACAGCAGAAACTAGCAGACAGAGAAAAGAGAGCAGCCGA
ACAACAAAGGAAGAAAATGGAAAAGGAAGCACAACGGCTAATGAAGAAGGAACAAAACAAAATTGGTGTG
AAACTTTCATAA

Translation (213 aa):
MAITQFRLFKFCTCLATVFSFLKRLICRSGRGRKLSGDQITLPTTVDYSSVPKQTDVEEWTSWDEDAPTS
VKIEGGNGNVATQQNSLEQLEPDYFKDMTPTIRKTQKIVIKKREPLNFGIPDGSTGFSSRLAATQDLPFI
HQSSELGDLDTWQENTNAWEEEEDAAWQAEEVLRQQKLADREKRAAEQQRKKMEKEAQRLMKKEQNKIGV
KLS


Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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