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Report for CCDS44950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44950.1 Public Homo sapiens 12 RASSF9 24 110 108 CCDS HistoryNCBI Gene:9182Re-query CCDS DB by CCDS ID:44950.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44950.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361228.5 ENSP00000354884.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361228.5Link to Ensembl Protein Viewer:ENSP00000354884.3Re-query CCDS DB by Nucleotide ID:ENST00000361228Re-query CCDS DB by Protein ID:ENSP00000354884
Original member Current member NCBI NM_005447.4 NP_005438.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005447.4Link to Protein Sequence:NP_005438.2Re-query CCDS DB by Nucleotide ID:NM_005447Re-query CCDS DB by Protein ID:NP_005438Link to BLAST:NP_005438.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005438.2 435 O75901 435 100% 0 0

Chromosomal Locations for CCDS 44950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 85804702 85805962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 85836155 85836201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1308 nt):
ATGGCTCCCTTTGGAAGAAACTTGCTAAAGACTCGGCATAAAAACAGATCTCCAACTAAAGACATGGATT
CAGAAGAGAAGGAAATTGTGGTTTGGGTTTGCCAAGAAGAGAAGCTTGTCTGTGGGCTGACTAAACGCAC
CACCTCTGCTGATGTCATCCAGGCTTTGCTTGAGGAACATGAGGCTACGTTTGGAGAGAAACGATTTCTT
CTGGGGAAGCCCAGTGATTACTGCATCATAGAGAAGTGGAGAGGCTCCGAAAGGGTTCTTCCTCCACTAA
CTAGAATCCTGAAGCTTTGGAAAGCGTGGGGAGATGAGCAGCCCAATATGCAATTTGTTTTGGTTAAAGC
AGATGCTTTTCTTCCAGTTCCTTTGTGGCGGACAGCTGAAGCCAAATTAGTGCAAAACACAGAAAAATTG
TGGGAGCTCAGCCCAGCAAACTACATGAAGACTTTACCACCAGATAAACAAAAAAGAATAGTCAGGAAAA
CTTTCCGGAAACTGGCTAAAATTAAGCAGGACACAGTTTCTCATGATCGAGATAATATGGAGACATTAGT
TCATCTGATCATTTCCCAGGACCATACTATTCATCAGCAAGTCAAGAGAATGAAAGAGCTGGATCTGGAA
ATTGAAAAGTGTGAAGCTAAGTTCCATCTTGATCGAGTAGAAAATGATGGAGAAAACTATGTTCAGGATG
CATATTTAATGCCCAGTTTCAGTGAAGTTGAGCAAAATCTAGACTTGCAGTATGAGGAAAACCAGACTCT
GGAGGACCTGAGCGAAAGTGATGGAATTGAACAGCTGGAAGAACGACTGAAATATTACCGAATACTCATT
GATAAGCTCTCTGCTGAAATAGAAAAAGAGGTAAAAAGTGTTTGCATTGATATAAATGAAGATGCGGAAG
GGGAAGCTGCAAGTGAACTGGAAAGCTCTAATTTAGAGAGTGTTAAGTGTGATTTGGAGAAAAGCATGAA
AGCTGGTTTGAAAATTCACTCTCATTTGAGTGGCATCCAGAAAGAGATTAAATACAGTGACTCATTGCTT
CAGATGAAAGCAAAAGAATATGAACTCCTGGCCAAGGAATTCAATTCACTTCACATTAGCAACAAAGATG
GGTGCCAGTTAAAGGAAAACAGAGCGAAGGAATCTGAGGTTCCCAGTAGCAATGGGGAGATTCCTCCCTT
TACTCAAAGAGTATTTAGCAATTACACAAATGACACAGACTCGGACACTGGTATCAGTTCTAACCACAGT
CAGGACTCCGAAACAACAGTAGGAGATGTGGTGCTGTTGTCAACATAG

Translation (435 aa):
MAPFGRNLLKTRHKNRSPTKDMDSEEKEIVVWVCQEEKLVCGLTKRTTSADVIQALLEEHEATFGEKRFL
LGKPSDYCIIEKWRGSERVLPPLTRILKLWKAWGDEQPNMQFVLVKADAFLPVPLWRTAEAKLVQNTEKL
WELSPANYMKTLPPDKQKRIVRKTFRKLAKIKQDTVSHDRDNMETLVHLIISQDHTIHQQVKRMKELDLE
IEKCEAKFHLDRVENDGENYVQDAYLMPSFSEVEQNLDLQYEENQTLEDLSESDGIEQLEERLKYYRILI
DKLSAEIEKEVKSVCIDINEDAEGEAASELESSNLESVKCDLEKSMKAGLKIHSHLSGIQKEIKYSDSLL
QMKAKEYELLAKEFNSLHISNKDGCQLKENRAKESEVPSSNGEIPPFTQRVFSNYTNDTDSDTGISSNHS
QDSETTVGDVVLLST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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