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Report for CCDS14118.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14118.1 Public Homo sapiens XY ZBED1 24 110 108 CCDS HistoryNCBI Gene:9189Re-query CCDS DB by CCDS ID:14118.1See the combined annotation on chromosome X in Sequence ViewerSee the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14118.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381218.8 ENSP00000370616.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381218.8Link to Ensembl Protein Viewer:ENSP00000370616.3Re-query CCDS DB by Nucleotide ID:ENST00000381218Re-query CCDS DB by Protein ID:ENSP00000370616
Original member Current member EBI ENST00000381222.8 ENSP00000370620.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381222.8Link to Ensembl Protein Viewer:ENSP00000370620.2Re-query CCDS DB by Nucleotide ID:ENST00000381222Re-query CCDS DB by Protein ID:ENSP00000370620
Original member Current member EBI ENST00000381223.9 ENSP00000370621.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381223.9Link to Ensembl Protein Viewer:ENSP00000370621.4Re-query CCDS DB by Nucleotide ID:ENST00000381223Re-query CCDS DB by Protein ID:ENSP00000370621
Original member Current member EBI ENST00000652001.1 ENSP00000498725.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000652001.1Link to Ensembl Protein Viewer:ENSP00000498725.1Re-query CCDS DB by Nucleotide ID:ENST00000652001Re-query CCDS DB by Protein ID:ENSP00000498725
Original member Current member NCBI NM_001171135.2 NP_001164606.1 Accepted alive Link to Nucleotide Sequence:NM_001171135.2Link to Protein Sequence:NP_001164606.1Re-query CCDS DB by Nucleotide ID:NM_001171135Re-query CCDS DB by Protein ID:NP_001164606Link to BLAST:NP_001164606.1
Original member Current member NCBI NM_001171136.2 NP_001164607.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001171136.2Link to Protein Sequence:NP_001164607.1Re-query CCDS DB by Nucleotide ID:NM_001171136Re-query CCDS DB by Protein ID:NP_001164607Link to BLAST:NP_001164607.1
Original member Current member NCBI NM_004729.4 NP_004720.1 Accepted alive Link to Nucleotide Sequence:NM_004729.4Link to Protein Sequence:NP_004720.1Re-query CCDS DB by Nucleotide ID:NM_004729Re-query CCDS DB by Protein ID:NP_004720Link to BLAST:NP_004720.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001164606.1 694 O96006 694 100% 0 0
NP_001164607.1 694 O96006 694 100% 0 0
NP_004720.1 694 O96006 694 100% 0 0

Chromosomal Locations for CCDS 14118.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11) On '-' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
X 2488635 2490719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

Chromosome Start Stop Links
Y 2488635 2490719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2085 nt):
ATGGAGAATAAAAGCCTGGAGAGCTCCCAGACAGACCTGAAGCTGGTGGCCCACCCCCGCGCCAAGAGCA
AGGTGTGGAAGTATTTCGGCTTCGACACCAACGCCGAGGGATGCATCCTGCAGTGGAAGAAAATCTACTG
CCGCATCTGCATGGCCCAGATCGCCTACTCCGGAAACACCTCCAACCTGTCCTACCACCTGGAGAAGAAC
CACCCCGAGGAATTCTGCGAGTTCGTCAAGAGCAACACGGAGCAGATGCGTGAAGCCTTCGCCACCGCCT
TCTCCAAGCTGAAGCCCGAGTCGTCCCAGCAGCCCGGGCAGGACGCGCTGGCCGTCAAGGCCGGCCACGG
CTACGACAGCAAGAAGCAGCAGGAGCTGACGGCCGCCGTGCTGGGCCTCATCTGCGAGGGGCTGTACCCA
GCCTCCATCGTGGACGAGCCCACCTTCAAGGTGCTGCTGAAGACGGCCGACCCCCGGTATGAGCTGCCCA
GCCGGAAGTACATCTCTACCAAGGCCATCCCTGAGAAGTACGGGGCCGTCCGGGAGGTGATCCTGAAGGA
GCTGGCCGAGGCCACCTGGTGTGGCATCTCCACCGACATGTGGAGGAGTGAGAATCAGAACCGCGCCTAC
GTCACGCTGGCCGCCCACTTCCTGGGCCTGGGCGCCCCCAACTGCCTGTCCATGGGCTCCCGCTGCCTGA
AGACCTTCGAGGTGCCCGAAGAGAACACGGCGGAGACCATCACGCGAGTGCTCTATGAGGTCTTCATCGA
GTGGGGCATCAGCGCCAAGGTCTTCGGGGCCACCACCAACTATGGCAAGGACATCGTGAAGGCGTGCTCC
CTGCTGGACGTCGCAGTGCACATGCCCTGCCTGGGCCACACCTTCAATGCCGGCATCCAGCAGGCCTTCC
AGCTCCCGAAGCTGGGGGCGCTGCTGTCGCGCTGCCGCAAACTGGTGGAGTACTTCCAGCAGTCTGCCGT
GGCCATGTACATGCTCTATGAGAAGCAGAAGCAGCAGAACGTGGCCCACTGCATGCTGGTGAGCAACCGC
GTCTCCTGGTGGGGGAGCACGCTGGCCATGCTGCAGCGCCTCAAGGAGCAGCAGTTCGTCATCGCCGGGG
TCTTGGTGGAGGACAGCAACAACCACCACCTCATGCTGGAGGCCAGCGAGTGGGCCACCATCGAGGGGCT
GGTGGAGCTCCTGCAGCCCTTCAAGCAGGTGGCCGAGATGCTGTCGGCCTCCAGGTACCCCACCATCAGC
ATGGTGAAGCCGCTGCTGCACATGCTCCTGAACACCACGCTCAACATCAAGGAGACCGACTCCAAGGAGC
TCAGCATGGCCAAGGAGGTCATCGCCAAGGAGCTTTCCAAGACCTACCAGGAGACGCCCGAGATCGACAT
GTTTCTCAACGTGGCCACCTTCCTGGACCCCCGCTACAAGAGGCTGCCCTTCCTCTCCGCCTTCGAGCGG
CAGCAGGTGGAGAATCGCGTGGTGGAAGAGGCCAAGGGCCTGCTGGACAAGGTCAAAGACGGCGGCTACC
GGCCGGCTGAGGACAAGATCTTCCCGGTGCCCGAGGAGCCTCCCGTCAAGAAGCTCATGCGGACATCCAC
GCCGCCGCCCGCCAGCGTCATCAACAACATGCTGGCCGAGATCTTCTGCCAGACAGGCGGCGTGGAGGAC
CAGGAAGAGTGGCATGCCCAGGTGGTGGAGGAGCTGAGCAACTTCAAGTCCCAGAAGGTGCTTGGCCTCA
ACGAAGACCCCCTCAAGTGGTGGTCAGACCGCCTGGCCCTCTTCCCCCTGCTGCCCAAGGTGCTGCAGAA
GTACTGGTGCGTGACGGCCACGCGCGTCGCCCCTGAGCGTCTCTTCGGATCCGCCGCCAACGTGGTCAGC
GCCAAGAGGAACCGGCTGGCTCCCGCGCACGTGGACGAGCAGGTGTTTCTGTATGAGAACGCCCGGAGTG
GGGCAGAGGCGGAACCCGAGGACCAGGACGAGGGGGAGTGGGGCCTGGACCAGGAGCAGGTGTTCTCCTT
GGGGGATGGCGTCAGCGGCGGTTTCTTTGGCATTAGGGACAGCAGCTTCCTGTAG

Translation (694 aa):
MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKN
HPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDSKKQQELTAAVLGLICEGLYP
ASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAVREVILKELAEATWCGISTDMWRSENQNRAY
VTLAAHFLGLGAPNCLSMGSRCLKTFEVPEENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACS
LLDVAVHMPCLGHTFNAGIQQAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNR
VSWWGSTLAMLQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTIS
MVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYKRLPFLSAFER
QQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPPASVINNMLAEIFCQTGGVED
QEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPLLPKVLQKYWCVTATRVAPERLFGSAANVVS
AKRNRLAPAHVDEQVFLYENARSGAEAEPEDQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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