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Report for CCDS387.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
387.2 Public Homo sapiens 1 ZMYM6 24 110 108 CCDS HistoryNCBI Gene:9204Re-query CCDS DB by CCDS ID:387.2See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 387.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357182.9 ENSP00000349708.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357182.9Link to Ensembl Protein Viewer:ENSP00000349708.4Re-query CCDS DB by Nucleotide ID:ENST00000357182Re-query CCDS DB by Protein ID:ENSP00000349708
Original member Current member NCBI NM_007167.4 NP_009098.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007167.4Link to Protein Sequence:NP_009098.3Re-query CCDS DB by Nucleotide ID:NM_007167Re-query CCDS DB by Protein ID:NP_009098Link to BLAST:NP_009098.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009098.3 1325 O95789-3 1325 100% 0 0

Chromosomal Locations for CCDS 387.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 34987104 34988935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34992234 34992387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35003968 35004005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35005132 35005272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35006951 35007098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35008752 35008924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35010447 35010597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35010758 35011036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35011890 35012005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35012431 35012581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35014697 35014888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35014988 35015162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35019353 35019602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35020383 35020467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 35030547 35030639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3978 nt):
ATGAAAGAACCTTTGGATGGTGAATGTGGCAAAGCAGTGGTACCACAGCAGGAGCTTCTGGACAAAATTA
AAGAAGAACCAGACAATGCTCAAGAGTATGGATGTGTCCAACAGCCAAAAACTCAAGAAAGTAAATTGAA
AATTGGTGGTGTGTCTTCAGTTAATGAGAGACCTATTGCCCAGCAGTTGAACCCAGGCTTTCAGCTTTCT
TTTGCATCATCTGGCCCAAGTGTGTTGCTTCCTTCAGTTCCAGCTGTTGCTATTAAGGTTTTTTGTTCTG
GTTGTAAAAAAATGCTTTATAAGGGCCAAACTGCATATCATAAGACAGGATCTACTCAGCTCTTCTGCTC
CACACGATGCATCACCAGACATTCTTCACCTGCCTGCCTGCCACCTCCTCCCAAGAAAACCTGCACAAAC
TGCTCGAAAGACATTTTAAATCCTAAGGATGTGATCACAACTCGCTTTGAGAATTCCTATCCTAGCAAAG
ATTTCTGCAGCCAATCATGCTTGTCATCTTATGAGCTAAAGAAAAAACCTGTTGTTACCATATATACCAA
AAGCATTTCAACTAAGTGCAGTATGTGTCAGAAGAATGCTGATACTCGATTTGAAGTTAAATATCAAAAT
GTGGTACATGGTCTTTGTAGTGATGCCTGTTTTTCAAAATTTCACTCTACAAACAACCTCACCATGAACT
GTTGTGAGAACTGTGGGAGCTATTGCTATAGTAGCTCTGGTCCTTGCCAATCCCAGAAGGTTTTTAGTTC
AACAAGTGTCACGGCATACAAGCAGAATTCTGCCCAAATTCCTCCATATGCCCTGGGGAAGTCATTGAGG
CCCTCAGCTGAAATGATTGAGACTACAAATGATTCAGGAAAAACAGAGCTTTTCTGCTCTATTAATTGCT
TATCTGCTTACAGAGTTAAGACTGTTACTTCTTCAGGTGTCCAGGTTTCATGTCATAGTTGTAAAACCTC
AGCAATCCCTCAGTATCACCTAGCCATGTCAAATGGAACTATATACAGCTTCTGCAGCTCCAGTTGTGTG
GTTGCTTTCCAGAATGTATTTAGCAAGCCAAAAGGAACAAACTCTTCGGCGGTGCCCCTGTCTCAGGGCC
AAGTGGTTGTAAGCCCGCCCTCCTCCAGGTCAGCAGTGTCAATAGGAGGAGGTAACACCTCTGCCGTTTC
CCCCAGCTCCATCCGTGGCTCTGCTGCAGCCAGCCTCCAACCTCTTGCTGAACAATCCCAGCAAGTTGCT
TTAACCCATACAGTTGTTAAACTCAAGTGTCAGCACTGTAACCATCTATTTGCCACAAAACCAGAACTTC
TTTTTTACAAGGGTAAAATGTTTCTGTTTTGTGGCAAGAATTGCTCTGATGAATACAAGAAGAAAAATAA
AGTTGTGGCAATGTGTGACTACTGTAAACTGCAGAAAATTATAAAGGAGACTGTGCGATTCTCAGGGGTT
GATAAGCCATTCTGTAGTGAAGTTTGCAAATTCCTCTCTGCCCGTGACTTTGGAGAACGATGGGGAAACT
ACTGTAAGATGTGCAGCTACTGTTCACAGACATCCCCAAATTTGGTAGAAAATCGATTGGAGGGCAAGTT
AGAAGAGTTTTGTTGTGAAGATTGTATGTCCAAATTTACAGTTCTGTTTTATCAGATGGCCAAGTGTGAT
GGTTGTAAACGACAGGGTAAACTAAGCGAGTCCATAAAGTGGCGAGGCAACATTAAACATTTCTGTAACC
TATTTTGTGTCTTGGAGTTTTGTCATCAGCAAATTATGAATGACTGTCTTCCACAAAATAAAGTAAATAT
TTCTAAAGCAAAAACTGCTGTGACGGAGCTCCCTTCTGCAAGGACAGATACAACACCAGTTATAACCAGT
GTGATGTCATTGGCAAAAATACCTGCTACCTTATCTACAGGGAACACTAACAGTGTTTTAAAAGGTGCAG
TTACTAAAGAGGCAGCAAAGATCATTCAAGATGAAAGTACACAGGAAGATGCTATGAAATTTCCATCTTC
CCAATCTTCCCAGCCTTCCAGGCTTTTAAAGAACAAAGGCATATCATGCAAACCCGTCACACAGACCAAG
GCCACTTCTTGCAAACCACATACACAGCACAAAGAATGTCAGACAGATTTACCTATGCCTAATGAAAAAA
ATGATGCAGAACTTGATTCTCCACCTTCAAAGAAAAAAAGATTAGGTTTTTTCCAGACTTATGATACAGA
ATATTTAAAAGTTGGTTTTATTATCTGTCCTGGATCAAAAGAAAGTTCACCAAGGCCACAGTGTGTCATT
TGTGGAGAGATCTTATCCAGTGAAAACATGAAGCCAGCAAATCTTTCTCATCATTTGAAGACAAAACATT
CAGAATTAGAAAACAAACCAGTAGATTTTTTTGAACAAAAATCTTTAGAAATGGAATGTCAAAATAGTTC
TTTAAAAAAGTGTTTACTAGTTGAAAAGTCACTTGTGAAAGCTTCTTATTTAATTGCTTTCCAAACTGCT
GCAAGCAAGAAGCCATTCTCCATTGCTGAAGAATTAATTAAACCATATTTAGTAGAAATGTGTTCAGAAG
TTTTGGGTTCAAGTGCTGGAGACAAAATGAAAACTATTCCACTTTCTAATGTTACAATTCAACACAGGAT
TGATGAACTATCTGCAGACATTGAAGACCAGCTGATTCAAAAGGTCAGAGAGTCAAAGTGGTTTGCCCTT
CAGATAGATGAGTCATCAGAAATCTCAAATATCACACTTCTTTTGTGCTATATTCGTTTCATTGATTATG
ATTGTCGTGATGTAAAAGAAGAATTATTATTTTGCATTGAAATGCCTACTCAAATAACTGGCTTTGAAAT
ATTTGAACTAATAAATAAATATATTGATAGTAAATCTCTGAATTGGAAACATTGTGTTGGTCTCTGTACC
GATGGGGCTGCAAGCATGACTGGCAGGTATTCTGGTTTAAAAGCAAAAATTCAAGAAGTTGCCATGAATA
CAGCGGCATTTACACATTGTTTTATTCACCGTGAACGTTTAGTGGCAGAAAAGTTGTCTCCATGTTTACA
TAAAATTCTTTTGCAGTCAGCACAAATTTTAAGTTTTATAAAGAGCAATGCATTAAATTCACGTATGTTA
ACAATTTTGTGTGAAGAGATGGGATCTGAGCATGTGAGTTTACCGCTTCATGCTGAAGTACGTTGGATAT
CAAGAGGGAGAATGTTAAAAAGATTATTTGAATTACGACATGAGATTGAAATATTTTTAAGTCAAAAGCA
TTCAGATTTGGCCAAGTATTTTCATGATGAGGAATGGGTTGGAAAGCTGGCCTACTTATCAGATATATTT
TCACTTATAAATGAATTAAATTTAAGTCTCCAAGGAACTTTGACTACTTTCTTCAATTTGTGTAATAAAA
TTGATGTATTTAAGAGAAAGTTAAAAATGTGGTTGAAGCGCACACAAGAGAATGATTATGACATGTTCCC
TTCATTTTCTGAATTCTCAAATTCATCAGGCTTAAATATGACAGACATCACAAGGATTATTTTTGAGCAC
CTGGAAGGACTTTCTCAAGTGTTCAGTGACTGTTTTCCACCAGAACAAGACTTGCGTTCAGGAAATTTGT
GGATAATTCACCCTTTTATGAATCACCAAAATAATAATCTCACCGACTTCGAAGAAGAAAAGCTAACAGA
GCTATCTTCAGATTTAGGATTACAAGCACTATTTAAATCAGTGTCTGTAACTCAGTTTTGGATAAATGCA
AAGACAAGTTACCCAGAACTCCATGAAAGGGCAATGAAATTTTTATTACCCTTTTCAACTGTTTATTTAT
GTGATGCTGCCTTTTCAGCTTTGACTGAGTCAAAACAAAAAAATCTGTTGGGTTCTGGCCCTGCCCTAAG
ACTTGCAGTCACATCTTTAATTCCAAGGATAGAAAAATTAGTGAAGGAGAAAGAGTAG

Translation (1325 aa):
MKEPLDGECGKAVVPQQELLDKIKEEPDNAQEYGCVQQPKTQESKLKIGGVSSVNERPIAQQLNPGFQLS
FASSGPSVLLPSVPAVAIKVFCSGCKKMLYKGQTAYHKTGSTQLFCSTRCITRHSSPACLPPPPKKTCTN
CSKDILNPKDVITTRFENSYPSKDFCSQSCLSSYELKKKPVVTIYTKSISTKCSMCQKNADTRFEVKYQN
VVHGLCSDACFSKFHSTNNLTMNCCENCGSYCYSSSGPCQSQKVFSSTSVTAYKQNSAQIPPYALGKSLR
PSAEMIETTNDSGKTELFCSINCLSAYRVKTVTSSGVQVSCHSCKTSAIPQYHLAMSNGTIYSFCSSSCV
VAFQNVFSKPKGTNSSAVPLSQGQVVVSPPSSRSAVSIGGGNTSAVSPSSIRGSAAASLQPLAEQSQQVA
LTHTVVKLKCQHCNHLFATKPELLFYKGKMFLFCGKNCSDEYKKKNKVVAMCDYCKLQKIIKETVRFSGV
DKPFCSEVCKFLSARDFGERWGNYCKMCSYCSQTSPNLVENRLEGKLEEFCCEDCMSKFTVLFYQMAKCD
GCKRQGKLSESIKWRGNIKHFCNLFCVLEFCHQQIMNDCLPQNKVNISKAKTAVTELPSARTDTTPVITS
VMSLAKIPATLSTGNTNSVLKGAVTKEAAKIIQDESTQEDAMKFPSSQSSQPSRLLKNKGISCKPVTQTK
ATSCKPHTQHKECQTDLPMPNEKNDAELDSPPSKKKRLGFFQTYDTEYLKVGFIICPGSKESSPRPQCVI
CGEILSSENMKPANLSHHLKTKHSELENKPVDFFEQKSLEMECQNSSLKKCLLVEKSLVKASYLIAFQTA
ASKKPFSIAEELIKPYLVEMCSEVLGSSAGDKMKTIPLSNVTIQHRIDELSADIEDQLIQKVRESKWFAL
QIDESSEISNITLLLCYIRFIDYDCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKSLNWKHCVGLCT
DGAASMTGRYSGLKAKIQEVAMNTAAFTHCFIHRERLVAEKLSPCLHKILLQSAQILSFIKSNALNSRML
TILCEEMGSEHVSLPLHAEVRWISRGRMLKRLFELRHEIEIFLSQKHSDLAKYFHDEEWVGKLAYLSDIF
SLINELNLSLQGTLTTFFNLCNKIDVFKRKLKMWLKRTQENDYDMFPSFSEFSNSSGLNMTDITRIIFEH
LEGLSQVFSDCFPPEQDLRSGNLWIIHPFMNHQNNNLTDFEEEKLTELSSDLGLQALFKSVSVTQFWINA
KTSYPELHERAMKFLLPFSTVYLCDAAFSALTESKQKNLLGSGPALRLAVTSLIPRIEKLVKEKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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