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Report for CCDS4353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4353.1 Public Homo sapiens 5 PTTG1 24 110 108 CCDS HistoryNCBI Gene:9232Re-query CCDS DB by CCDS ID:4353.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4353.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352433.10 ENSP00000344936.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000352433.10Link to Ensembl Protein Viewer:ENSP00000344936.5Re-query CCDS DB by Nucleotide ID:ENST00000352433Re-query CCDS DB by Protein ID:ENSP00000344936
Original member Current member EBI ENST00000393964.1 ENSP00000377536.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393964.1Link to Ensembl Protein Viewer:ENSP00000377536.1Re-query CCDS DB by Nucleotide ID:ENST00000393964Re-query CCDS DB by Protein ID:ENSP00000377536
Original member Current member EBI ENST00000520452.5 ENSP00000430642.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520452.5Link to Ensembl Protein Viewer:ENSP00000430642.1Re-query CCDS DB by Nucleotide ID:ENST00000520452Re-query CCDS DB by Protein ID:ENSP00000430642
Original member Current member NCBI NM_001282382.1 NP_001269311.1 Accepted alive Link to Nucleotide Sequence:NM_001282382.1Link to Protein Sequence:NP_001269311.1Re-query CCDS DB by Nucleotide ID:NM_001282382Re-query CCDS DB by Protein ID:NP_001269311Link to BLAST:NP_001269311.1
Original member Current member NCBI NM_001282383.1 NP_001269312.1 Accepted alive Link to Nucleotide Sequence:NM_001282383.1Link to Protein Sequence:NP_001269312.1Re-query CCDS DB by Nucleotide ID:NM_001282383Re-query CCDS DB by Protein ID:NP_001269312Link to BLAST:NP_001269312.1
Original member Current member NCBI NM_004219.4 NP_004210.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004219.4Link to Protein Sequence:NP_004210.1Re-query CCDS DB by Nucleotide ID:NM_004219Re-query CCDS DB by Protein ID:NP_004210Link to BLAST:NP_004210.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269311.1 202 O95997 202 100% 0 0
NP_001269312.1 202 O95997 202 100% 0 0
NP_004210.1 202 O95997 202 100% 0 0

Chromosomal Locations for CCDS 4353.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 160422313 160422403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160422709 160422893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160424237 160424330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160427715 160427873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 160428602 160428681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (609 nt):
ATGGCTACTCTGATCTATGTTGATAAGGAAAATGGAGAACCAGGCACCCGTGTGGTTGCTAAGGATGGGC
TGAAGCTGGGGTCTGGACCTTCAATCAAAGCCTTAGATGGGAGATCTCAAGTTTCAACACCACGTTTTGG
CAAAACGTTCGATGCCCCACCAGCCTTACCTAAAGCTACTAGAAAGGCTTTGGGAACTGTCAACAGAGCT
ACAGAAAAGTCTGTAAAGACCAAGGGACCCCTCAAACAAAAACAGCCAAGCTTTTCTGCCAAAAAGATGA
CTGAGAAGACTGTTAAAGCAAAAAGCTCTGTTCCTGCCTCAGATGATGCCTATCCAGAAATAGAAAAATT
CTTTCCCTTCAATCCTCTAGACTTTGAGAGTTTTGACCTGCCTGAAGAGCACCAGATTGCGCACCTCCCC
TTGAGTGGAGTGCCTCTCATGATCCTTGACGAGGAGAGAGAGCTTGAAAAGCTGTTTCAGCTGGGCCCCC
CTTCACCTGTGAAGATGCCCTCTCCACCATGGGAATCCAATCTGTTGCAGTCTCCTTCAAGCATTCTGTC
GACCCTGGATGTTGAATTGCCACCTGTTTGCTGTGACATAGATATTTAA

Translation (202 aa):
MATLIYVDKENGEPGTRVVAKDGLKLGSGPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRA
TEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLP
LSGVPLMILDEERELEKLFQLGPPSPVKMPSPPWESNLLQSPSSILSTLDVELPPVCCDIDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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