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Report for CCDS4772.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4772.1 Public Homo sapiens 6 WDR46 24 110 108 CCDS HistoryNCBI Gene:9277Re-query CCDS DB by CCDS ID:4772.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4772.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374617.9 ENSP00000363746.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374617.9Link to Ensembl Protein Viewer:ENSP00000363746.4Re-query CCDS DB by Nucleotide ID:ENST00000374617Re-query CCDS DB by Protein ID:ENSP00000363746
Original member Current member NCBI NM_005452.6 NP_005443.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005452.6Link to Protein Sequence:NP_005443.3Re-query CCDS DB by Nucleotide ID:NM_005452Re-query CCDS DB by Protein ID:NP_005443Link to BLAST:NP_005443.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005443.3 610 O15213 610 100% 0 0

Chromosomal Locations for CCDS 4772.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 33279276 33279374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33279497 33279610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33279764 33279859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33280428 33280522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33280674 33280987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33286795 33286894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33287091 33287226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33287355 33287505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33287614 33287718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33287965 33288026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33288148 33288235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33288358 33288470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33288614 33288694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33288804 33289013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 33289102 33289170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1833 nt):
ATGGAGACAGCCCCCAAGCCGGGCAAGGATGTCCCGCCCAAGAAAGACAAACTTCAGACCAAGAGAAAGA
AACCGCGGCGATACTGGGAGGAAGAGACCGTTCCGACCACAGCCGGAGCCTCTCCAGGGCCTCCTCGTAA
CAAGAAGAATCGGGAGCTCCGTCCTCAGAGACCAAAAAATGCTTACATCTTAAAGAAGTCTCGGATCTCT
AAGAAGCCTCAGGTCCCGAAGAAACCCCGAGAATGGAAGAACCCGGAGTCCCAGCGCGGCTTGTCCGGGA
CCCAAGATCCATTCCCAGGCCCCGCCCCCGTCCCTGTGGAAGTGGTCCAGAAGTTCTGTCGCATTGACAA
ATCCCGAAAGCTACCACATTCTAAAGCCAAAACTCGAAGCCGACTTGAGGTGGCTGAAGCTGAGGAAGAG
GAAACAAGTATCAAAGCTGCTCGTTCTGAGCTGCTGCTTGCTGAAGAACCTGGGTTTCTGGAAGGGGAGG
ATGGGGAAGACACAGCAAAGATATGCCAGGCTGACATTGTGGAGGCTGTGGACATTGCAAGTGCAGCCAA
GCACTTTGACTTGAATCTGCGGCAGTTTGGACCCTACAGACTAAACTACTCTCGAACTGGAAGACACCTG
GCTTTTGGAGGGCGCCGAGGTCATGTGGCTGCCCTTGATTGGGTAACAAAGAAGCTTATGTGCGAGATCA
ACGTCATGGAGGCGGTGCGGGACATCCGGTTTCTCCATTCTGAGGCACTGCTTGCTGTTGCTCAGAACCG
CTGGCTCCACATCTATGACAATCAGGGCATTGAGCTCCACTGTATCCGCCGCTGTGACCGAGTAACACGG
CTTGAGTTCCTGCCCTTCCACTTCCTCCTGGCTACAGCTTCAGAAACAGGGTTTCTAACCTACCTGGATG
TGTCAGTGGGGAAGATTGTGGCAGCTCTGAATGCTCGAGCTGGGCGGCTCGATGTTATGAGTCAGAACCC
TTACAATGCCGTCATCCATCTCGGACACAGCAATGGTACTGTGTCTTTATGGAGTCCAGCTATGAAGGAG
CCACTGGCAAAGATTCTCTGTCATCGTGGTGGGGTCCGGGCTGTGGCAGTAGATTCTACAGGCACGTACA
TGGCCACCTCTGGCCTAGACCACCAGCTGAAGATCTTTGACTTGCGAGGGACGTACCAGCCTCTGAGCAC
TCGGACCCTGCCCCATGGAGCAGGGCACCTGGCCTTCTCCCAGAGGGGACTGCTGGTGGCGGGAATGGGT
GACGTTGTCAACATCTGGGCAGGGCAGGGCAAGGCCAGCCCACCCTCCCTTGAACAGCCCTACCTCACCC
ACCGGCTCTCAGGCCCTGTGCATGGCCTTCAGTTCTGCCCCTTTGAAGATGTGCTGGGGGTGGGGCACAC
TGGGGGCATCACCAGCATGCTGGTCCCTGGGGCCGGTGAGCCCAACTTCGATGGCCTGGAGAGTAATCCA
TACAGAAGCCGGAAGCAGCGCCAGGAGTGGGAGGTGAAGGCCCTGCTAGAGAAGGTACCTGCAGAGCTTA
TTTGTCTGGACCCACGAGCCCTGGCCGAGGTGGATGTCATCTCCCTGGAGCAGGGAAAGAAGGAGCAGAT
AGAGAGGCTGGGCTATGACCCGCAGGCTAAGGCTCCCTTCCAGCCAAAGCCAAAGCAGAAGGGCCGCAGC
TCCACGGCAAGCCTGGTGAAGAGGAAGAGGAAGGTCATGGATGAGGAACACAGGGACAAGGTCCGGCAGA
GCCTTCAGCAGCAGCATCATAAGGAGGCGAAGGCCAAGCCCACGGGGGCCCGGCCATCTGCCCTGGACAG
ATTTGTGCGCTGA

Translation (610 aa):
METAPKPGKDVPPKKDKLQTKRKKPRRYWEEETVPTTAGASPGPPRNKKNRELRPQRPKNAYILKKSRIS
KKPQVPKKPREWKNPESQRGLSGTQDPFPGPAPVPVEVVQKFCRIDKSRKLPHSKAKTRSRLEVAEAEEE
ETSIKAARSELLLAEEPGFLEGEDGEDTAKICQADIVEAVDIASAAKHFDLNLRQFGPYRLNYSRTGRHL
AFGGRRGHVAALDWVTKKLMCEINVMEAVRDIRFLHSEALLAVAQNRWLHIYDNQGIELHCIRRCDRVTR
LEFLPFHFLLATASETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIHLGHSNGTVSLWSPAMKE
PLAKILCHRGGVRAVAVDSTGTYMATSGLDHQLKIFDLRGTYQPLSTRTLPHGAGHLAFSQRGLLVAGMG
DVVNIWAGQGKASPPSLEQPYLTHRLSGPVHGLQFCPFEDVLGVGHTGGITSMLVPGAGEPNFDGLESNP
YRSRKQRQEWEVKALLEKVPAELICLDPRALAEVDVISLEQGKKEQIERLGYDPQAKAPFQPKPKQKGRS
STASLVKRKRKVMDEEHRDKVRQSLQQQHHKEAKAKPTGARPSALDRFVR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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