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Report for CCDS31847.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31847.1 Public Homo sapiens 12 MARCHF9 24 110 108 CCDS HistoryNCBI Gene:92979Re-query CCDS DB by CCDS ID:31847.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31847.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000266643.6 ENSP00000266643.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000266643.6Link to Ensembl Protein Viewer:ENSP00000266643.5Re-query CCDS DB by Nucleotide ID:ENST00000266643Re-query CCDS DB by Protein ID:ENSP00000266643
Original member Current member NCBI NM_138396.6 NP_612405.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138396.6Link to Protein Sequence:NP_612405.2Re-query CCDS DB by Nucleotide ID:NM_138396Re-query CCDS DB by Protein ID:NP_612405Link to BLAST:NP_612405.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612405.2 346 Q86YJ5-1 346 100% 0 0

Chromosomal Locations for CCDS 31847.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57755529 57755885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57756929 57757084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57758108 57758300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57758563 57758897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1041 nt):
ATGCTCAAGTCTCGGCTCCGCATGTTTCTGAACGAGCTGAAGCTGCTGGTGCTGACAGGCGGGGGGCGGC
CCCGGGCCGAGCCGCAACCCCGGGGGGGCCGGGGAGGCGGCTGCGGCTGGGCGCCCTTCGCTGGCTGCTC
CACCCGGGACGGCGACGGCGACGAGGAGGAGTACTACGGGTCGGAGCCGCGGGCCCGGGGCCTGGCCGGC
GACAAGGAGCCGCGGGCCGGACCCCTGCCGCCGCCCGCGCCGCCGCTGCCGCCCCCGGGCGCGCTGGACG
CCCTGTCGCTCAGCAGTAGCCTGGACAGCGGACTCCGAACCCCTCAGTGCCGGATCTGCTTCCAGGGCCC
GGAGCAGGGGGAGCTCTTAAGCCCCTGCCGCTGCGACGGCTCAGTGCGCTGCACGCATCAGCCCTGCCTC
ATCCGCTGGATCAGCGAGAGGGGCTCCTGGAGCTGTGAGCTCTGCTACTTCAAGTACCAGGTCCTGGCGA
TCAGCACCAAGAACCCACTGCAGTGGCAGGCCATCTCCCTGACGGTCATCGAGAAGGTCCAGATTGCTGC
CATAGTTCTGGGCTCGCTCTTCCTGGTTGCCAGCATCTCCTGGCTCATCTGGTCCTCACTCAGCCCTTCA
GCCAAGTGGCAACGACAGGATCTGCTCTTTCAGATCTGCTACGGCATGTATGGCTTCATGGATGTCGTCT
GCATAGGCCTCATCATCCATGAAGGCTCCTCTGTCTACCGCATCTTCAAGCGCTGGCAGGCAGTGAACCA
GCAGTGGAAGGTCCTAAATTATGACAAGACCAAGGACATAGGAGGAGATGCAGGGGGAGGGACGGCAGGG
AAGTCAGGCCCCAGGAACTCACGGACGGGCCCCACCTCTGGGGCCACGAGCCGCCCCCCAGCTGCCCAGC
GCATGCGGACGCTCTTGCCTCAGCGCTGCGGTTATACAATCTTGCACCTCCTTGGGCAGCTGCGGCCACC
AGATGCCCGTTCCAGCTCCCATTCTGGCCGAGAGGTTGTCATGAGGGTCACTACAGTCTGA

Translation (346 aa):
MLKSRLRMFLNELKLLVLTGGGRPRAEPQPRGGRGGGCGWAPFAGCSTRDGDGDEEEYYGSEPRARGLAG
DKEPRAGPLPPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICFQGPEQGELLSPCRCDGSVRCTHQPCL
IRWISERGSWSCELCYFKYQVLAISTKNPLQWQAISLTVIEKVQIAAIVLGSLFLVASISWLIWSSLSPS
AKWQRQDLLFQICYGMYGFMDVVCIGLIIHEGSSVYRIFKRWQAVNQQWKVLNYDKTKDIGGDAGGGTAG
KSGPRNSRTGPTSGATSRPPAAQRMRTLLPQRCGYTILHLLGQLRPPDARSSSHSGREVVMRVTTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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