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Report for CCDS43723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43723.1 Public Homo sapiens 8 PHYHIP 24 110 108 CCDS HistoryNCBI Gene:9796Re-query CCDS DB by CCDS ID:43723.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321613.7 ENSP00000320017.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321613.7Link to Ensembl Protein Viewer:ENSP00000320017.3Re-query CCDS DB by Nucleotide ID:ENST00000321613Re-query CCDS DB by Protein ID:ENSP00000320017
Original member Current member EBI ENST00000454243.7 ENSP00000415491.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000454243.7Link to Ensembl Protein Viewer:ENSP00000415491.2Re-query CCDS DB by Nucleotide ID:ENST00000454243Re-query CCDS DB by Protein ID:ENSP00000415491
Original member Current member NCBI NM_001099335.2 NP_001092805.1 Accepted alive Link to Nucleotide Sequence:NM_001099335.2Link to Protein Sequence:NP_001092805.1Re-query CCDS DB by Nucleotide ID:NM_001099335Re-query CCDS DB by Protein ID:NP_001092805Link to BLAST:NP_001092805.1
Original member Current member NCBI NM_001363311.2 NP_001350240.1 Accepted alive Link to Nucleotide Sequence:NM_001363311.2Link to Protein Sequence:NP_001350240.1Re-query CCDS DB by Nucleotide ID:NM_001363311Re-query CCDS DB by Protein ID:NP_001350240Link to BLAST:NP_001350240.1
Original member Current member NCBI NM_001363312.2 NP_001350241.1 Accepted alive Link to Nucleotide Sequence:NM_001363312.2Link to Protein Sequence:NP_001350241.1Re-query CCDS DB by Nucleotide ID:NM_001363312Re-query CCDS DB by Protein ID:NP_001350241Link to BLAST:NP_001350241.1
Original member Current member NCBI NM_014759.5 NP_055574.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014759.5Link to Protein Sequence:NP_055574.3Re-query CCDS DB by Nucleotide ID:NM_014759Re-query CCDS DB by Protein ID:NP_055574Link to BLAST:NP_055574.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092805.1 330 Q92561 330 100% 0 0
NP_001350240.1 330 Q92561 330 100% 0 0
NP_001350241.1 330 Q92561 330 100% 0 0
NP_055574.3 330 Q92561 330 100% 0 0

Chromosomal Locations for CCDS 43723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22221353 22221887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22224226 22224343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22226851 22227025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22228193 22228357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (993 nt):
ATGGAGCTGCTGTCCACGCCCCACAGCATTGAGATCAACAACATCACCTGCGACTCCTTCCGCATCTCCT
GGGCCATGGAGGACAGTGACCTGGAGAGGGTCACCCATTACTTCATTGACCTTAACAAGAAGGAGAATAA
GAATTCCAACAAGTTCAAGCACCGGGACGTCCCCACCAAGCTCGTGGCCAAGGCAGTGCCGCTGCCCATG
ACGGTGAGAGGCCACTGGTTCCTGAGCCCCCGCACGGAGTACAGTGTGGCCGTGCAGACGGCAGTGAAGC
AGAGCGATGGGGAGTACCTGGTGTCCGGCTGGAGCGAGACGGTGGAGTTCTGCACTGGGGATTATGCCAA
GGAGCACCTGGCTCAGCTTCAGGAGAAAGCTGAGCAGATCGCAGGCCGCATGCTCCGCTTCTCCGTCTTC
TACCGCAACCATCACAAGGAGTACTTCCAGCATGCCAGGACCCACTGCGGGAACATGCTGCAGCCTTACC
TGAAGGACAACAGTGGCAGCCACGGCTCCCCCACCAGCGGTATGCTCCACGGGGTCTTCTTCAGCTGCAA
CACGGAGTTCAACACGGGCCAGCCCCCGCAGGACTCCCCCTACGGCCGCTGGCGCTTCCAGATCCCAGCT
CAGCGCCTCTTCAATCCCAGCACCAACCTCTACTTTGCGGACTTCTACTGCATGTACACGGCCTACCACT
ACGCCATCCTGGTGCTGGCGCCCAAAGGCTCCCTGGGGGACCGCTTCTGCCGCGACCGCCTGCCCCTCCT
GGACATTGCTTGCAACAAGTTCCTGACCTGCAGCGTGGAGGATGGGGAGCTGGTCTTCCGCCACGCCCAG
GACCTCATCCTGGAGATCATCTACACTGAGCCCGTCGACCTGTCCCTGGGCACCCTGGGGGAGATCAGTG
GGCACCAGCTCATGAGTCTGTCTACTGCCGATGCCAAGAAGGACCCCAGCTGCAAGACCTGCAACATCAG
CGTGGGCCGCTAG

Translation (330 aa):
MELLSTPHSIEINNITCDSFRISWAMEDSDLERVTHYFIDLNKKENKNSNKFKHRDVPTKLVAKAVPLPM
TVRGHWFLSPRTEYSVAVQTAVKQSDGEYLVSGWSETVEFCTGDYAKEHLAQLQEKAEQIAGRMLRFSVF
YRNHHKEYFQHARTHCGNMLQPYLKDNSGSHGSPTSGMLHGVFFSCNTEFNTGQPPQDSPYGRWRFQIPA
QRLFNPSTNLYFADFYCMYTAYHYAILVLAPKGSLGDRFCRDRLPLLDIACNKFLTCSVEDGELVFRHAQ
DLILEIIYTEPVDLSLGTLGEISGHQLMSLSTADAKKDPSCKTCNISVGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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