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Report for CCDS73170.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
73170.1 |
Public |
Homo sapiens |
10 |
ZNF518A |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:9849](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:73170.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 10 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 73170.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000316045.10 |
ENSP00000479684.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000316045.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000479684.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000316045](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000479684](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000614149.2 |
ENSP00000481657.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000614149.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000481657.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000614149](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000481657](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000624776.4 |
ENSP00000485614.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000624776.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000485614.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000624776](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000485614](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001278524.2 |
NP_001265453.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001278524.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001265453.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001278524](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001265453](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001265453.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001278525.2 |
NP_001265454.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001278525.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001265454.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001278525](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001265454](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001265454.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330732.2 |
NP_001317661.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330732.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317661.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330732](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317661](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317661.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330733.1 |
NP_001317662.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330733.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317662.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330733](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317662](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317662.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330734.1 |
NP_001317663.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330734.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317663.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330734](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317663](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317663.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330735.1 |
NP_001317664.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330735.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317664.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330735](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317664](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317664.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330736.2 |
NP_001317665.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330736.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317665.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330736](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317665](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317665.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330737.1 |
NP_001317666.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330737.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317666.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330737](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317666](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317666.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330738.1 |
NP_001317667.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330738.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317667.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330738](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317667](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317667.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_014803.4 |
NP_055618.2 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_014803.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_055618.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_014803](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_055618](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_055618.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 73170.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4452 nt): ATGCCATCTGAACAGAAACAGTTATTTTGTGATGAAAAACAAACTACTTTAAAAAAAGATTATGATGTGA AAAATGAGATAGTTGATAGGTCGGCACCTAAACCAAAAATTTCAGGAAGTATTCATTATGCACTAAAAAA TGTGAAAATTGATTTGCCAAAAATAAATATTCCAAATGAAGTCCTATTGAAACATGAAGTTGACAAATAC AGAAAATTATTTCAGAGTAAACAGCAGACTGCAAGAAAATCTATCAGTATAAAGACTGTAAGCTGTGTAG AGGAGTGTACATTGCTTCATAAGTCTGAGAGAGCTGAAGAAGAGGGTGTAAAAATGTCTGCAAAAATACT CAATTTCAGCTGTTTAAAATGCCGAGACAACACTCGATATAGCCCAAATGATTTGCAGAAACACTTTCAA ATGTGGCACCATGGCGAATTACCTTCATATCCTTGTGAAATGTGCAACTTTTCAGCAAATGACTTTCAGG TATTTAAACAACACAGACGAACCCATAGAAGCACTTTAGTAAAATGTGACATTTGTAACAATGAGAGTGT ATATACTTTACTGAACTTGACAAAGCATTTCACATCCACACATTGTGTTAATGGTAATTTTCAATGTGAA AAGTGTAAGTTCTCCACCCAGGATGTTGGCACATTTGTTCAGCACATTCATAGACATAATGAAATTCATT ATAAGTGTGGTAAATGTCATCATGTATGTTTTACCAAAGGAGAGCTTCAGAAGCACCTTCATATTCATTC TGGTACTTTTCCCTTCACTTGTCAATATTGTAGCTATGGTGCCACCAGGAGAGAACACCTTGTAAGACAT GTTATAACTTTGCACAAAGAACATTTATATGCAAAAGAAAAACTGGAAAAAGACAAATATGAAAAAAGAA TGGCAAAGACTTCTGCAGGACTTAAGCTAATACTGAAAAGATATAAAATAGGTGCATCAAGGAAGACGTT CTGGAAACGTAAGAAAATTAACAGTGGAAGTGACAGAAGTATAGAAAAGAACACTCAAGTGCTTAAGAAA ATGAACAAAACACAGACTAAATCTGAAGACCAGAGCCATGTTGTTCAAGAGCATTTAAGTGAAGAAAAGG ATGAAAGACTACACTGTGAGAATAATGATAAAGCCCCTGAATCAGAGTCAGAGAAGCCAACTCCTCTGTC CACTGGGCAAGGTAATAGAGCTGAAGAGGGACCAAACGCTAGTTCAGGTTTCATGAAGACTGCTGTACTA GGACCTACACTGAAAAATGTAATGATGAAAAATAATAAACTAGCAGTTTCCCCTAACTATAATGCTACGT TTATGGGCTTCAAGATGATGGATGGAAAACAGCATATTGTATTAAAATTGGTGCCTATCAAACAAAATGT ATGTTCACCAGGCTCACAGTCAGGTGCTGCAAAGGACGGTACTGCTAATTTGCAGCCCCAGACTTTGGAC ACTAATGGATTTTTAACAGGAGTAACAACTGAGTTAAATGACACAGTTTATATGAAAGCAGCTACTCCAT TTTCATGTTCATCTTCTATACTTTCAGGGAAAGCAAGTTCAGAAAAAGAAATGACTTTGATATCTCAAAG GAATAATATGCTTCAAACAATGGATTATGAGAAAAGTGTATCTTCTTTGTCAGCAACATCAGAATTGGTT ACAGCATCAGTGAATTTGACCACAAAATTTGAAACAAGAGATAATGTTGACTTCTGGGGAAATCATCTCA CTCAGAGTCACCCCGAGGTATTAGGTACCACCATTAAAAGTCCAGATAAAGTCAACTGTGTTGCCAAACC AAATGCATACAACAGTGGAGATATGCATAATTATTGCATTAATTATGGCAACTGTGAGTTACCTGTTGAA TCCTCCAACCAAGGATCATTACCTTTTCATAATTACTCAAAAGTGAATAATTCTAATAAACGTCGTAGGT TTTCAGGAACAGCAGTGTATGAAAACCCTCAAAGAGAATCTTCATCCAGCAAAACAGTTGTCCAACAACC AATTAGTGAATCATTTTTATCACTAGTGAGGCAGGAGAGCTCAAAACCAGATAGCCTATTAGCATCTATT AGCCTTTTAAATGATAAAGATGGAACTTTAAAAGCAAAATCTGAAATTGAAGAACAGTATGTTTTAGAAA AAGGACAAAACATTGATGGACAAAACCTGTACAGTAATGAAAATCAAAATTTAGAGTGTGCGACTGAAAA ATCTAAATGGGAAGACTTTTCTAATGTCGATTCACCTATGATGCCTAGAATCACATCTGTTTTCTCTCTC CAGAGCCAACAGGCATCAGAATTTCTGCCACCTGAAGTAAACCAATTGCTTCAGGATGTATTGAAAATAA AACCTGATGTAAAACAAGACTCTAGTAACACTCCAAATAAAGGCTTGCCACTTCATTGTGACCAGTCATT TCAAAAACACGAGAGAGAAGGCAAAATTGTTGAATCTTCGAAAGATTTCAAAGTGCAAGGCATCTTCCCA GTTCCACCTGGCAGTGTGGGTATTAATGTGCCTACAAATGATTTGAATTTGAAATTTGGAAAAGAAAAAC AAGTGTCATCAATACCACAAGATGTGAGAGATTCAGAGAAGATGCCTAGAATTTCAGGTTTTGGCACATT ACTTAAGACTCAGTCAGATGCGATAATAACACAGCAGCTTGTAAAAGACAAACTACGAGCCACCACACAA AATTTAGGTTCTTTTTATATGCAGAGTCCACTTTTAAATTCAGAACAAAAAAAAACTATAATTGTTCAGA CTTCAAAAGGATTCTTAATACCATTGAACATTACTAACAAGCCTGGGCTACCAGTTATTCCTGGAAATGC ACTTCCATTGGTTAATTCACAAGGTATCCCTGCTTCTCTTTTTGTAAACAAGAAACCTGGGATGGTTTTA ACACTTAATAATGGGAAACTTGAAGGTGTTTCCGCTGTCAAAACCGAGGGTGCCCCAGCTCGTGGAACTG TGACTAAGGAGCCTTGCAAAACACCTATTTTGAAGGTAGAACCAAACAATAATTGTCTTACACCTGGACT TTGTTCCAGCATTGGCAGTTGTTTGAGCATGAAAAGTAGCTCAGAAAATACTTTGCCATTAAAAGGCCCT TACATTTTGAAACCAACGAGTTCTGTGAAAGCTGTTCTTATTCCTAACATGCTATCTGAGCAACAGAGCA CTAAGTTGAATATCTCCGATTCAGTAAAACAGCAGAATGAGATTTTTCCAAAACCACCTCTTTATACCTT CTTGCCTGATGGCAAACAAGCTGTTTTTTTAAAGTGTGTGATGCCAAATAAAACTGAGCTGCTTAAGCCC AAATTAGTCCAAAATAGTACTTATCAAAATATACAGCCAAAGAAACCTGAAGGAACACCACAAAGAATAT TGCTGAAAATTTTTAACCCTGTTTTAAATGTGACTGCTGCTAATAATCTGTCAGTAAGCAACTCTGCATC CTCATTGCAAAAAGACAACGTACCATCTAATCAGATTATAGGAGGAGAGCAGAAAGAGCCAGAATCTAGA GATGCCTTACCCTTCTTACTAGATGACTTAATGCCAGCAAATGAAATTGTGATAACTTCTACTGCAACAT GCCCAGAATCTTCTGAGGAACCAATATGTGTCAGTGACTGTTCAGAGTCCAGGGTATTAAGGTGTAAAAC AAATTGTAGAATTGAGAGGAACTTCAATAGAAAAAAGACTTCCAAAAAAATTTTTTCAAAAACAAAAACT CATGGAAGTAAAGACTCTGAAACTGCCTTTGTATCTAGAAACAGAAACTGTAAACGAAAGTGTAGGGATA GTTACCAAGAACCTCCAAGAAGAAAAGCAACATTGCATAGAAAGTGTAAAGAAAAGGCAAAACCTGAAGA TGTCCGTGAAACATTTGGATTTAGCAGACCTAGGCTTTCAAAAGATTCCATCAGAACTTTGCGGCTTTTC CCTTTTAGTTCTAAACAGCTTGTGAAATGTCCTAGGAGAAACCAACCAGTTGTAGTTTTGAATCATCCTG ACGCAGATGCACCAGAAGTAGTAAGTGTAATGAAAACTATTGCTAAATTTAATGGACATGTACTTAAGGT TTCATTGTCAAAAAGAACTATAAATGCTTTACTGAAACCAGTTTGTTATAACCCTCCTAAAACAACTTAT GATGATTTTTCCAAGAGGCACAAAACATTTAAACCTGTTAGTTCTGTGAAAGAAAGATTTGTGCTAAAAT TAACACTCAAAAAGACAAGCAAAAACAATTACCAGATTGTGAAGACTACCTCTGAAAATATTTTGAAGGC TAAATTTAACTGTTGGTTTTGTGGTAGAGTATTTGACAATCAGGATACTTGGGCTGGTCATGGGCAGAGA CATTTAATGGAAGCTACTCGGGATTGGAACATGTTAGAATAG
Translation (1483 aa): MPSEQKQLFCDEKQTTLKKDYDVKNEIVDRSAPKPKISGSIHYALKNVKIDLPKINIPNEVLLKHEVDKY RKLFQSKQQTARKSISIKTVSCVEECTLLHKSERAEEEGVKMSAKILNFSCLKCRDNTRYSPNDLQKHFQ MWHHGELPSYPCEMCNFSANDFQVFKQHRRTHRSTLVKCDICNNESVYTLLNLTKHFTSTHCVNGNFQCE KCKFSTQDVGTFVQHIHRHNEIHYKCGKCHHVCFTKGELQKHLHIHSGTFPFTCQYCSYGATRREHLVRH VITLHKEHLYAKEKLEKDKYEKRMAKTSAGLKLILKRYKIGASRKTFWKRKKINSGSDRSIEKNTQVLKK MNKTQTKSEDQSHVVQEHLSEEKDERLHCENNDKAPESESEKPTPLSTGQGNRAEEGPNASSGFMKTAVL GPTLKNVMMKNNKLAVSPNYNATFMGFKMMDGKQHIVLKLVPIKQNVCSPGSQSGAAKDGTANLQPQTLD TNGFLTGVTTELNDTVYMKAATPFSCSSSILSGKASSEKEMTLISQRNNMLQTMDYEKSVSSLSATSELV TASVNLTTKFETRDNVDFWGNHLTQSHPEVLGTTIKSPDKVNCVAKPNAYNSGDMHNYCINYGNCELPVE SSNQGSLPFHNYSKVNNSNKRRRFSGTAVYENPQRESSSSKTVVQQPISESFLSLVRQESSKPDSLLASI SLLNDKDGTLKAKSEIEEQYVLEKGQNIDGQNLYSNENQNLECATEKSKWEDFSNVDSPMMPRITSVFSL QSQQASEFLPPEVNQLLQDVLKIKPDVKQDSSNTPNKGLPLHCDQSFQKHEREGKIVESSKDFKVQGIFP VPPGSVGINVPTNDLNLKFGKEKQVSSIPQDVRDSEKMPRISGFGTLLKTQSDAIITQQLVKDKLRATTQ NLGSFYMQSPLLNSEQKKTIIVQTSKGFLIPLNITNKPGLPVIPGNALPLVNSQGIPASLFVNKKPGMVL TLNNGKLEGVSAVKTEGAPARGTVTKEPCKTPILKVEPNNNCLTPGLCSSIGSCLSMKSSSENTLPLKGP YILKPTSSVKAVLIPNMLSEQQSTKLNISDSVKQQNEIFPKPPLYTFLPDGKQAVFLKCVMPNKTELLKP KLVQNSTYQNIQPKKPEGTPQRILLKIFNPVLNVTAANNLSVSNSASSLQKDNVPSNQIIGGEQKEPESR DALPFLLDDLMPANEIVITSTATCPESSEEPICVSDCSESRVLRCKTNCRIERNFNRKKTSKKIFSKTKT HGSKDSETAFVSRNRNCKRKCRDSYQEPPRRKATLHRKCKEKAKPEDVRETFGFSRPRLSKDSIRTLRLF PFSSKQLVKCPRRNQPVVVLNHPDADAPEVVSVMKTIAKFNGHVLKVSLSKRTINALLKPVCYNPPKTTY DDFSKRHKTFKPVSSVKERFVLKLTLKKTSKNNYQIVKTTSENILKAKFNCWFCGRVFDNQDTWAGHGQR HLMEATRDWNMLE
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