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Report for CCDS81999.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81999.1 Public Homo sapiens 16 RANBP10 24 110 108 CCDS HistoryNCBI Gene:57610Re-query CCDS DB by CCDS ID:81999.1Re-query CCDS DB by GeneID:57610See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81999.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448631.6 ENSP00000392808.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000448631.6Link to Ensembl Protein Viewer:ENSP00000392808.2Re-query CCDS DB by Nucleotide ID:ENST00000448631Re-query CCDS DB by Protein ID:ENSP00000392808
Original member Current member NCBI NM_001320239.2 NP_001307168.1 Accepted alive Link to Nucleotide Sequence:NM_001320239.2Link to Protein Sequence:NP_001307168.1Re-query CCDS DB by Nucleotide ID:NM_001320239Re-query CCDS DB by Protein ID:NP_001307168Link to BLAST:NP_001307168.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307168.1 594 Q6VN20-3 594 100% 0 0

Chromosomal Locations for CCDS 81999.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67726428 67726558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67727327 67727438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67727751 67727896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67728390 67728601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729280 67729484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729680 67729828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67729938 67730046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67731472 67731584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67734858 67735042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67738013 67738035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67772034 67772086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67805428 67805539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67806302 67806536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1785 nt):
ATGGCGGCAGCGACGGCAGACCCGGGAGCTGGGAACCCGCAGCCTGGGGACTCCTCCGGCGGGGGCGCTG
GGGGCGGGCTGCCGTCCCCTGGGGAGCAGGAGCTGAGCCGGCGCTTGCAGCGCCTGTATCCCGCGGTCAA
CCAGCAAGAGACTCCGCTGCCGCGCTCCTGGAGCCCCAAGGACAAATACAACTACATTGGTCTCTCCCAG
GGCAACCTCCGCGTCCACTACAAAGGTCATGGCAAAAATCACAAAGATGCGGCCTCAGTGCGTGCCACCC
ACCCCATACCTGCTGCCTGTGGCATTTATTACTTTGAAGTGAAGATTGTCAGCAAAGGAAGAGATGGTTA
CATGGGAATAGGACTCTCGGCTCAAGGCGTCAACATGAACAGACTTCCTGGTATAGCCTTCACAGACCTC
CCGGCCAACCTCTACCCCACCGTAGGCCTGCAGACACCTGGGGAGATTGTGGACGCCAACTTTGGGCAGC
AGCCCTTCCTGTTTGACATTGAGGACTACATGCGGGAGTGGCGTGCCAAGGTCCAGGGCACGGTCCACTG
CTTCCCCATCAGTGCCCGGCTTGGCGAGTGGCAGGCAGTGCTGCAGAACATGGTTTCATCTTACCTCGTG
CATCATGGGTATTGTGCCACAGCCACGGCTTTTGCTCGAATGACTGAAACCCCGATTCAGGAAGAACAGG
CGTCCATAAAGAACAGACAAAAGATCCAGAAGCTGGTGCTGGAGGGCCGTGTGGGCGAGGCCATCGAGAC
CACCCAGCGCTTCTACCCAGGGCTGCTGGAGCACAACCCCAACCTCCTCTTCATGCTCAAGTGCCGGCAG
TTTGTGGAGATGGTGAATGGGACGGACAGTGAGGTCCGAAGTTTGAGCTCCCGAAGCCCCAAGTCCCAGG
ACAGCTACCCTGGCTCCCCCAGCCTCAGTCCCCGACATGGCCCCAGTAGTTCCCACATGCACAACACAGG
AGCAGACAGTCCCAGCTGTAGCAATGGCGTCGCGTCCACCAAGAGCAAACAGAACCACAGTAAATACCCT
GCACCCAGCTCCTCATCCTCGTCCTCCTCCTCCTCCTCGTCCTCTTCCCCATCCTCCGTCAATTACTCCG
AGTCCAACTCAACAGACTCCACCAAGTCCCAGCACCACAGCAGTACCAGTAACCAGGAGACCAGCAACCC
ATGGCTACAGCTTGAAAGGAGGCCCAACCAGGCTGCTCCAACCACACCCCCTGGGCCAACTCCCACCTCA
ACCCCTCCCCACAGCGACAGTGAGATGGAGATGGAGGCAGAGCACTACCCCAACGGTGTGCTAGGAAGCA
TGTCCACACGCATTGTTAATGGTGCCTACAAGCATGAGGACCTGCAGACGGATGAGTCCAGCATGGATGA
CAGGCATCCTCGGCGGCAGCTCTGCGGGGGCAACCAGGCTGCCACAGAAAGGATCATTCTGTTTGGCCGC
GAGTTGCAGGCATTGAGTGAGCAGTTGGGCCGGGAGTACGGCAAGAATTTGGCCCACACAGAGATGCTGC
AGGATGCCTTCAGCCTGCTGGCATACTCAGACCCCTGGAGCTGCCCAGTTGGCCAGCAGCTTGACCCCAT
CCAGAGGGAACCTGTGTGTGCTGCCCTCAACAGCGCCATTTTAGAGTCCCAGAACCTGCCAAAGCAGCCC
CCTCTGATGCTCGCCCTGGGCCAGGCATCTGAGTGTCTCCGGCTCATGGCCCGAGCAGGCCTGGGTTCTT
GCTCCTTTGCCAGAGTTGATGACTACTTGCACTAG

Translation (594 aa):
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKYNYIGLSQ
GNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGIAFTDL
PANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLV
HHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQ
FVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYP
APSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSNPWLQLERRPNQAAPTTPPGPTPTS
TPPHSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGR
ELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQP
PLMLALGQASECLRLMARAGLGSCSFARVDDYLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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