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Report for CCDS10152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10152.1 Public Homo sapiens 15 RSL24D1 24 110 108 CCDS HistoryNCBI Gene:51187Re-query CCDS DB by CCDS ID:10152.1Re-query CCDS DB by GeneID:51187See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260443.9 ENSP00000260443.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260443.9Link to Ensembl Protein Viewer:ENSP00000260443.4Re-query CCDS DB by Nucleotide ID:ENST00000260443Re-query CCDS DB by Protein ID:ENSP00000260443
Original member Current member NCBI NM_016304.3 NP_057388.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016304.3Link to Protein Sequence:NP_057388.1Re-query CCDS DB by Nucleotide ID:NM_016304Re-query CCDS DB by Protein ID:NP_057388Link to BLAST:NP_057388.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057388.1 163 Q9UHA3 163 100% 0 0

Chromosomal Locations for CCDS 10152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 55182152 55182225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55183315 55183400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55185362 55185425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55190975 55191047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55192720 55192833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 55196810 55196890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (492 nt):
ATGCGTATCGAAAAGTGTTATTTCTGTTCGGGGCCCATCTATCCTGGACACGGCATGATGTTCGTCCGCA
ACGATTGCAAGGTGTTCAGATTTTGCAAATCTAAATGTCATAAAAACTTTAAAAAGAAGCGCAATCCTCG
CAAAGTTAGGTGGACCAAAGCATTCCGGAAAGCAGCTGGTAAAGAGCTTACAGTGGATAATTCATTTGAA
TTTGAAAAACGTAGAAATGAACCTATCAAATACCAGCGAGAGCTATGGAATAAAACTATTGATGCGATGA
AGAGAGTTGAAGAAATCAAACAGAAGCGCCAAGCTAAATTTATAATGAACAGATTGAAGAAAAATAAAGA
GCTACAGAAAGTTCAGGATATCAAAGAAGTCAAGCAAAACATCCATCTTATCCGAGCCCCTCTTGCAGGC
AAAGGGAAACAGTTGGAAGAGAAAATGGTACAGCAGTTACAAGAGGATGTGGACATGGAAGATGCTCCTT
AA

Translation (163 aa):
MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTVDNSFE
FEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIKEVKQNIHLIRAPLAG
KGKQLEEKMVQQLQEDVDMEDAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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